| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Actinostola_05223 | PHD-TYPE DOMAIN-CONTAINING PROTEIN | scaffold490_size307202 | 117304 | 140104 | + |
| CDS | |||||
| Actinostola_05223 | |||||
| Transcript |
| Actinostola_05223 |
| Protein |
| Actinostola_05223 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01391 | Collagen | Collagen triple helix repeat (20 copies) | Repeat | Interproscan |
| PF07534 | TLD | TLD | Domain | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF12012 | DUF3504 | Domain of unknown function (DUF3504) | Family | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF18701 | DUF5641 | Family of unknown function (DUF5641) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR006571 | Domain | TLDc domain | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR008160 | Repeat | Collagen triple helix repeat | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR021893 | Domain | Domain of unknown function DUF3504 | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR040676 | Domain | Domain of unknown function DUF5641 | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47331 | PHD-TYPE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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