Detailed information of Actinostola_17608 in Actinostola sp. Cb2023 Gene info
Gene IDAnnotationScaffoldStartEndStrand
Actinostola_17608HL01030P-RELATEDscaffold5_size1483770826956836871-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF21524SAMD1_WHSAM domain-containing protein 1, WH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001660DomainSterile alpha motif domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR048589DomainSAM domain-containing protein 1-like, WH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45888HL01030P-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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