Detailed information of Blon|HiC_10G000697 in Branchipolynoe longqiensis Gene info
Gene IDAnnotationChromosomeStartEndStrand
Blon|HiC_10G000697MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13HiC_scaffold_105655182556618113-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF00664ABC_membraneABC transporter transmembrane regionFamilyInterproscan
PF06333Med13_CMediator complex subunit 13 C-terminal domainDomainInterproscan
PF18296MID_MedPIWIMID domain of medPIWIDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR009401DomainMediator complex subunit Med13, C-terminalInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR017871Conserved_siteABC transporter-like, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR030254DomainATP-binding cassette subfamily B member 9, six-transmembrane helical domainInterproscan
IPR036640Homologous_superfamilyABC transporter type 1, transmembrane domain superfamilyInterproscan
IPR041285DomainMID domain of medPIWIInterproscan
IPR051139FamilyMediator complex subunit 13Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR48249MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003712Molecular Functiontranscription coregulator activityInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005765Cellular Componentlysosomal membraneInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0015440Molecular FunctionABC-type peptide transporter activityInterproscan
GO:0015833Biological Processpeptide transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016592Cellular Componentmediator complexInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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