Gene detail

Detailed information of Blon|HiC_2G000619 in Branchipolynoe longqiensis Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Blon\|HiC_2G000619	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	HiC_scaffold_2	47183430	47218517	-

Gene Structure

More details in Jbrowse Sequence

CDS

Blon|HiC_2G000619

ATGAAGGGCTATGTCGTGGTCAACTCCATCGACGTCGATATGAACTTGGCCTATGGGGCCATCTCGTCAGCCATTTACAACAAGGCGGGCCCGGCTCTGCAAACAGCCATCAATCTGTTCCCGGGCCCCGGCAAGCATGGAGACCTACTCAGTACGTCTGGACTCAGACTCAGGGCACGTGCTGTCTACCACGCAATCCTCTGCAATTTCAACAAGCCGGATGCTGGAGATGTGTTGGAAAGCCTGGTGCTGAAGTGTTTGAATCTGGCGGACGAGGACAAGTACACCTCCATCGCTATCCCTGCCTTGGGTACTGGAGGGCACGAGTTTCCGTCGTTTGTGGTGGCGCACCGGATGTTGGAGGCAATCCGCCGCTATGAGCAGCAGGAAGGAGAGCACGCCAGGGTCAAGATTGTCCGAATCGTGTTGCAAGAGGACAAGTGCATTTCAGCCTTCCAATGTACTTTGAATGAAATCCCCTGCACGTCTCAAAAGGCATTGGTAGAAAAGATGAAAGATGTTCATCAAGAAGGACTGGGCCCCCACAGTAAAATACGGGATGCGAAACCACACTCGAACCCAGTCAACCGTGGTATCTATGGGGTCGATAACCCCACTATATCTACACTCTCACGCAGGAACACTCTACCCACAAAACTAGTTAACGCTCTCCGTATGAACGTTGTCTTCAAGAAGGAGGAGCTAATCAGCCAGCTGCGCACCTTTTATCGGGAACTGCCATGCCCGGGCAACCTAATGTGCTGGCCCTATGTGGTCACCTCCAAGAAGCAGACACTGTGCAGCCGCGACATGGATGCGCTCGTCAACACCATGGTGGGCACTGAGGTTCACCGGAAGCGGAGCCTAGTGCTGTTGCATGGGGGCGCCTACGTGGGCAAGTCGAGTCTCGTGAACCGGTTGGCGCGCCTTTGGGCAGACGGCGAGCTGAAGCATATCCGGCTGGTGCTTGTGGTGAACCTGTCCGTCCTGCTGGCCAGCCATAACTCTCGACCGCCTACATTGGAACAGTGCCTACTGCAGTGCTTCCAGGCGGCAGGCATCGACGAGGTCGGCTTCAAACGCATCTTCGATTACGAGAAGGGCAAGATATTGCTGCTGATAGACGACGCTGAGTCGTGGTGCGAACTCTTCAGCAAGGAGCTGCAGCAGAACCCAATCTTCTTCAAGGCGCATGTGGTAGTGACGTCACGTACCGCCGTGTCGGTGCGCCTGGCCGCTGCTTTTCATCCGAAGCTCACTGTGGAGCTGCAGGGCTTTGGCAACGAGCTCATCCAGCAGTTCTGTCTCGACAGAAGCCCCAGAAGTTCGCTCAAACTGGCCAATGTCATGTCGCATATTGTTACAAACACCACTGGTGTGAACCTGACGGCGATGCCTGGGTGGCTGGAGCACTGTCACCAGGTGATCGAGAAGGGCAGTATGTATGGCACGAGATCGGAGGAGCTGCTGCAGCGCCAGATCTGGTTGTTTAGCGCCTTCCTCGAAATGAACATGGCACCCAAGTGGCTTGCACTGTTTCGCAAGGTGCAGCTGCAGCTGGGCGAGGCCTTCCTCTTGTACTACCTCAAGAAGCAGAATCCGCAGTGGAGGCGGTTCAATGAGGTCGACCTTCTCACCGTCGGACCGAGTCCACGCCTACTCATTGACTACTGTATGGCGACTTACATCATCAGCGAGCTGGACAGCAAGGGCCACCCGCCGCACGACCTGCATAGCAATATGGAGCATGCGTACATGCTGCAGACTTCGCTGGAGATCTCATGCGGTCAGAGCATGAAGATAAGCCAGGCAATCAAGTGCCTCATCACGAATATGGCTGACTTTGACGGCAGCGTGCTGAAAGCTCGGGAGCATGCGCTGGATGTAGACAATACAAATAGTGCGCGCATCCTGAAACGGGTCAACGACCTGCAAGTCGGTTGTCTGCGTCAGAGCAGCACGTTACAGAAATATGATGCAGGCGTGCCGGACGACCTATACTACCTGGGTGCCGAGTATGCACGCGTCTACCAGCTGGCCTGCGAGCAGGGCACCAAGGCCGTGCGGCGCACGCGCGTCATGATCGTCGGCCACTACGGCGCCGGCAAGACGAGCGTCAAGCGCCGCCTGGTGAACGAGAGGTTCGACCAGCAGCACGTCGTCACCAACAGCATCGACGTCGACCTGGACTTTCGCATGATCCACGTGGATGACGCCTCCAGGCGCTGGAATGTCATCAAGAAAGCTCTGGGTGTGAAGGACGAACACAGCAGTGAGGTTGCGGGAATATTGTACAACTTCATCAAGAAAGTCAACTCAAGTGCGCTACCTGTTAGCAGTGAGGGAATCGAGGTACACACCCCTGATGTAGAATTTCCACCAAGCTTAGATTTCGAGTCATCTCCACTCCTACCCAGTGAACCTTCAGTCCAGGATGAATTAGATGGGCCTATTTCCAACGAGAACAATAATCTTGACGTTTGTAAAGTTCAACGGGACCAGGGCAGTACCAACTCAAGTATAGGAAGTGGCCCTTCGCCGATGCGGTCCATGTCCATGACTGCTCTTGTGTCAGCCATGGGGGCTGCCGGGCTGTCCGATGCCGAGAAGGTAGTGGATACTTTCCCAGAGGCCATCGTGTGTGAACTCAAGAAGCTCATGAACATGGATTCTGACCGCCGAGTGACCCCTGGTGGCCATCATGGGCACGCAGAGACTTGCACCTCCGAAAGCAACAATGAGGTAAGCTTCACCTTCTGGGACTTTGCCGGCCAGCATGTGTTCTACACGACGCACCAGACGTTCCTGACGCACCGCGCCATCTACCTGGTTGTGTTGGACCTAACCCGCCCGCTGCATAGTACCGTCAAATCGGATCGCCCCAGTCGGGATGGAATGGTGGCGGACCTGGCATGTCCCCAGACTGTTGGCGAATATCTGGACTTTTGGCTCAACTCCATCCATACCCATTCGGTGAGGAGTGACTCGCAGAGGCAGCAGCAGCAGCAGCAGCAGCAGTTTCTCACCCCACCACCCGTCATCATAATCTGCACGCACAGGGATGTACTCGAGCAGGAACACGGCAAGGAGGAAGCTAACCGAAAGGTCAAAGAGTACTTTGAATCAATTAACAAGTACCTGGATGGCAAGGCCTTTCATGACCATGTATCGCGCAACTTTTTCGCATTGGCCAACAGCATCGACTGTGATCCCTCTCTGGATGCCTTGCGTGCCGACCTTGTGCGGGTGGCTGAGAATCAGTCGTATTGGGGCGAACCGATCCCTCTCAAATGGCTGGCACTTCGAGCCAAGCTGGACGACCTTCACAACAATGCAAGAAGGGTGGTTACCAGGAGCGACATAATTATGCTGGCTCATAAAGTGGGCATTTCATGTCCAACAGAGGTGGTCACCTTCCTTCTCTTCTATCATGCACTTGGTGAGCTCATCTTTTTCGATGAGGACTCACTCCGTGAGCTGGTGATCCTTGACCTACAATGGCTCATTGAAAACTTCCGGGAGGTGATCACCATCCGTAAGTTCCACAAGCAGAAACCGTTCCCGGACAGCTTCAAACACTGGGCCAATGTGGACACCTATGGTGTTTTAAATGACATAATCCTTCAGCAAGTATGGGATCCGTCCTACAAAGACCAGCTTGTGTCAATCATGCAGAAATTCAATCTGATCTTGCCCATTAGCAATGACTACAAGCCAACCGACACATTCGTGGTGCCAGGGTGGGTTAAGAGTGAAACGCAGCTCTACCTGGTGCCCTGCATGCTCCCTCAGGCACAGCCGCAGGACATCCGTTTGCCTGGCGAGGGAGACCCTAGTCCACTGCTTCTGACCTTCACGGAAGGCTTTGTGCCACTGGGCGTCTTCCACCGTCTCATTGCAATGTGCATCAATCAGATGCACTGGGAGTGTTTTGGTGTAGTGTACAACAACTTTGCCTCCTTCCTACCTTGGCCAGAAAAGGTTGAGGACGTGATGATCAGCATCTATGCACAACCGGAGCACATCGAGATAACTGCGTGTTCTCTGGGTGAAGACAGAGTGAGCACTTGGTGTCAGGAGCTGCTTCCTCAGGCACTGCGCACAATCACCGAGAAGCTAACGGTGGCTATGCGCATCGTCTGTCCCACACAGAGCTTCTTTTTGGCAGTCAGGTGCACGTGCAAGGGTAAGGGTCAGCAGGGTAGCATCGTCAACCTGGACAGAATCCAGCCAGGTCTCTGCACCAAAAAGAACATTCGATGCGCTGCACACAAGGCCACCTTCAGTTCCCAGCCTTTACAACTCTGGTTTGGAAAGCAGCCTGAGATGTCGCCAGCTGCAGCGTGTTTGCCTTCTGTTTCGACCACCGCGCCTCCAGATGCGGAGCCGAGCGAGAAGCGGCTGCTCACACTGGCTAAAGAACTTGGGATCGAGTGGGAGGAGCTGGCCATCCGGCTCGGGCTGACAATTGCAAACATCGACCAGTTAAAAATGGACCATCCCACCGCAGTGACGCGCTCCACCCACATGCTCGCCAGCTGGCGCCACAAGCAGCGTGAGGTGCCGCTAGGGCGGCGCATTGAGCACCTCATAAACGCACTGAGGACCAGCAGTCGCCTCGACCTGGCAGAGAAGGTCGCCACCTGGTCGGTGATGTGTGAGTAG

Transcript

Blon|HiC_2G000619

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF01661	Macro	Macro domain	Domain	Interproscan
PF05729	NACHT	NACHT domain	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR002589	Domain	Macro domain	Interproscan
IPR007111	Domain	NACHT nucleoside triphosphatase	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR043472	Homologous_superfamily	Macro domain-like	Interproscan
IPR052056	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0010629	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-