Gene detail

Detailed information of Bpl_scaf_11482-3.1 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_11482-3.1	GLYCOPROTEIN HORMONE RECEPTOR	Bpl_scaf_11482	307197	309491	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_11482-3.1

ATGGAACTACGGTTAAAGGGGACTAAAACACTACGACAATTTCCGTCTGTTCTTCATTTTAACAAAATAAAAATAGCAGAGGTATATTATCCACACCATTGTTGCTTATTCAAAAATCCAGAAAAGCAAGATCCATCTAAGTGGAAAGCCTATTTGGAATTTCAGAGAAGAGTCCAGCTCGAATGTTCAATGTCTACATTTGGATCAACCGTTAGTACCACTAAATCGGGACTTCATGAAAATGAAATGTCTACGACAGCATATTCATTTGGATTTGGAAAGCGGGTGAAGCGGCAAGGCTTCATCTACAATCAAACCAATAAAATCGGTTTCGGAGATATGGTTGATCCTTCAATGTCCAATAAATCGACGAATCAACTACACTTCGTAGGCAACAAGTGTGATGATTCAAATGGTCTGTTTAATGATAAGGTATCCGTTCCTCCCAATTCAACAAATACTTTAACAGCATATTGTGGACAAGTTGTGAAAGATTATCGTCAAGTGATATGTACACCGGAACCGGATGCGTTTAATCCATGTGAAGATCTGATGGGTTACGAATGGTTACGAATATTTGTGTGGATTATATTACTTGCTGCTTTATTTGGTAATTCTGTGGTTCTAATTGTACTAATTAAAAGTAGAAGCAAAATGAGCGTTACTAAATTTCTAATGTGCAATCTAGCGTTTGCGGACTTGACGATGGGCATTTATTTGCTACTTTTAGCATCAATTGATGCACATACGCTAGGCGAATATTTTAATTATGCTGTTATTTGGCAGAATGAAGGAGGCTGTCAAGCAGCAGGATTTTTGACCGTATTTTCTTGTGAACTGTCAATATTTACACTGACTATAATAACCCTTGAACGATGGTATGCTATCAGTCACGCTATACATCTCACTAAGCGCCTACGCATTCGACAGGCTATGCTTTTTATGGCATTTGGATGGATTTATGCTTTATTTATGGCACATTTGCCTTTAGTAGGAATAAGTAGCTACGGCCATGTTAGTATATGTCTTCCTATGAAAGTTGATGACGCCATCGATGTTGCTTATGTTGTCTCTATTCTCGTAGTAAACGGAGTGGCATTTCTCTGTATTTGTGGCTGTTATATCAATATGTACTGTAAGGTCAGAGGAAGCCATACTAATGTCCGCAACAATGACGCCAAAATTGCAAAACGCATGGCTATGCTTGTGTTTACAAATTTTGCTTGCTGGGCACCGATTGCCTTCTTTGGATTGACAGCGTCAGCTGGTATACCTCTAATTGATATCACTCATTCTAAAATACTATTAGTATTTTTCTATCCTTTAAATTCATTTGCAAATCCTTACTTATATGTAATAATTACAAAACAATTTCGCAAAGACTTGTACATATTACTAGGAAAATATGGAATTTGTACTGAAAGAGCTAACCGTTATAGGGTAACATTCACAAGCACCTATTCTAGAAATAGTTTGGCACTTCATAATAACATCCAAAACTCCAACAGAAATGGCATAAGCAAATCAAAATCGATTTGTCCTTCAGCATTTTCAAGGTCACTATCAAACAGCGAATCAAACTGCTCAACCTCCACGTTTCTCCATAGCAACTCCAAACAAGCATCAATAAGGATACGACTCCCTGAAACAAAGACAATAGTAGATAAAATTCTCAAAGAAACTCCTGAAACCTCTACTACAGAAAGGCGCCTTCGTTCACCTCCACCATATATTCGTAGTGCTAGTGAATATGTAGTGTTCTTCCCACCTCCGAGAAGAGACAGCTATCCTAAATATAAATATCAAGCTGGAAGAACAGTGAGTGCAGATACTAGTCTAACTAGTAACATGACTGAGTCATCATGTGATTCCTCCATCGAAGATAATCCATGGATCCTGCATAAGCATGTGGTGCTAGAGGGCAATGAACAAGAGTATAAAATTAACTCTATAGACGAAGAGATCTTAGAAGAATTTGAAAATAAAAAGCTTTCAGATGTTAAAACATTCAATAATATATTATCTCAAAGCTGTGACAACAGTCTACATCAAAAGGCTTATTTCTATACTTCAGACAATGAGTGTGAAGATGACAACATCCAACAAACTTTATTGAAGCATTGTACTTTACGAGAATCGCCAGTGTCAACGATGGAGAAAAAATGTCCCAGTGATTCTATACTAAATGACCTTAGTAAGAATTTTGGTGAAAATAACAGCATTGTTACATGTCCATCAAAAAGTAACCCTAGCATAGACGTATTAAAAAGAAATGGTATTATGATGAATCAATGA

Transcript

Bpl_scaf_11482-3.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR002131	Family	Glycoprotein hormone receptor family	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24372	GLYCOPROTEIN HORMONE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0007190	Biological Process	activation of adenylate cyclase activity	Interproscan
GO:0008528	Molecular Function	G protein-coupled peptide receptor activity	Interproscan
GO:0009755	Biological Process	hormone-mediated signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016500	Molecular Function	protein-hormone receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04249	TSHR; thyroid stimulating hormone receptor	-	cAMP signaling pathway	ko04024	PMID: 28812709
			Neuroactive ligand-receptor interaction	ko04080	PMID: 28812709
			Regulation of lipolysis in adipocyte	ko04923	PMID: 28812709
			Thyroid hormone synthesis	ko04918	PMID: 28812709
			Autoimmune thyroid disease	ko05320	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_11482-3.1 global RNA-seq network