Detailed information of Bpl_scaf_11672-1.26 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_11672-1.26REPLICATION PROTEIN A3Bpl_scaf_116728317490513+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08661Rep_fac-A_3Replication factor A protein 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013970FamilyReplication factor A protein 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15114REPLICATION PROTEIN A3Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005662Cellular ComponentDNA replication factor A complexInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006284Biological Processbase-excision repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10740RPA3; replication factor A3-DNA replication ko03030PMID: 28812709
Nucleotide excision repair ko03420PMID: 28812709
Mismatch repair ko03430PMID: 28812709
Homologous recombination ko03440PMID: 28812709
Fanconi anemia pathway ko03460PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_11672-1.26 global RNA-seq network
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