| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13042-1.41 | 60S RIBOSOMAL PROTEIN L11-RELATED | Bpl_scaf_13042 | 141023 | 161016 | + |
| CDS | |||||
| Bpl_scaf_13042-1.41 | |||||
| Transcript |
| Bpl_scaf_13042-1.41 |
| Protein |
| Bpl_scaf_13042-1.41 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00281 | Ribosomal_L5 | Ribosomal protein L5 | Domain | Interproscan |
| PF00673 | Ribosomal_L5_C | ribosomal L5P family C-terminus | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002132 | Family | Large ribosomal subunit protein uL5 | Interproscan |
| IPR020929 | Conserved_site | Large ribosomal subunit protein uL5, conserved site | Interproscan |
| IPR022803 | Homologous_superfamily | Large ribosomal subunit protein uL5 domain superfamily | Interproscan |
| IPR031309 | Domain | Large ribosomal subunit protein uL5, C-terminal | Interproscan |
| IPR031310 | Domain | Large ribosomal subunit protein uL5, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11994 | 60S RIBOSOMAL PROTEIN L11-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0022625 | Cellular Component | cytosolic large ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K02868 | RP-L11e, RPL11; large subunit ribosomal protein L11e | - | Ribosome | ko03010 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13042-1.41 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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