Detailed information of Bpl_scaf_13066-0.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_13066-0.6DNA2/NAM7 HELICASE FAMILY MEMBERBpl_scaf_130661232641109-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01424R3HR3H domainDomainInterproscan
PF01428zf-AN1AN1-like Zinc fingerFamilyInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF21138SMUBP-2_HCS1_1BHelicase SMUBP-2/HCS1, 1B domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000058DomainZinc finger, AN1-typeInterproscan
IPR001374DomainR3H domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004483FamilyHelicase SMUBP-2/Hcs1-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035896Homologous_superfamilyAN1-like Zinc fingerInterproscan
IPR036867Homologous_superfamilyR3H domain superfamilyInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR048761DomainHelicase SMUBP-2/HCS1, 1B domainInterproscan
IPR050534FamilyCoronaviruses polyprotein 1abInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43788DNA2/NAM7 HELICASE FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043139Molecular Function5'-3' DNA helicase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19036IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2EC:5.6.2.5
EC:5.6.2.3
Ribosome biogenesisko03009PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_13066-0.6 global RNA-seq network
TOP