| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13236-10.24 | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 | Bpl_scaf_13236 | 1072963 | 1116188 | + |
| CDS | |||||
| Bpl_scaf_13236-10.24 | |||||
| Transcript |
| Bpl_scaf_13236-10.24 |
| Protein |
| Bpl_scaf_13236-10.24 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR039900 | Family | Pat1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21551 | TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000290 | Biological Process | deadenylation-dependent decapping of nuclear-transcribed mRNA | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0033962 | Biological Process | P-body assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K12617 | PATL1, PAT1; DNA topoisomerase 2-associated protein PAT1 | - | RNA degradation | ko03018 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13236-10.24 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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