| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13258-3.14 | BRIX DOMAIN CONTAINING PROTEIN | Bpl_scaf_13258 | 310192 | 330696 | + |
| CDS | |||||
| Bpl_scaf_13258-3.14 | |||||
| Transcript |
| Bpl_scaf_13258-3.14 |
| Protein |
| Bpl_scaf_13258-3.14 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04427 | Brix | Brix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007109 | Domain | Brix domain | Interproscan |
| IPR039770 | Family | Ribosome biogenesis protein Rpf2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12728 | BRIX DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000027 | Biological Process | ribosomal large subunit assembly | Interproscan |
| GO:0000463 | Biological Process | maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | Interproscan |
| GO:0000470 | Biological Process | maturation of LSU-rRNA | Interproscan |
| GO:0005730 | Cellular Component | nucleolus | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K14847 | RPF2; ribosome production factor 2 | - | Ribosome biogenesis | ko03009 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13258-3.14 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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