Gene detail

Detailed information of Bpl_scaf_13642-4.27 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_13642-4.27	DELTA(14)-STEROL REDUCTASE	Bpl_scaf_13642	391248	402424	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_13642-4.27

ATGGCTACGAGTCCCATGTGTGACTCATGCATAACCGACGGAAGGGATAATCTTGCTGTTAACTGGTGTATGGAATGTGAGGAAATAATTTGTTCCGAATGTACACATAGACATAATTTGGATAAGACATTGAAAAGTCATCATCGTGTAGACTTGAGAGAGAAGATCGCTTTATCTAATGTACCCACGACCTGTGAGGTACATCCAGACAAACAGTTAGAATATATTTGTACAGACCACGACCATGTCTGTTGTCAGGATTGTCTTGCTCAACTCCACAAATTATGTTCAAATACAATGTTGGTACAATCATTCTCAGAGAATGTCAAACAATCACAGATGTTGGCAGATTGTAATCAACATCTCGATGTCTTATTGGAAACATTTGAGAAAATGTCGGCAAATAGAAAGACAAATTTGGCTGATTTAGAAAAAGATGGAAAAATAGTTAAAGATCAAATATGTAAATTAAAACTTGTAGACGAAATGGAGAAAAAATGGTTATTAAATGAAGTTGATCTGATTATACGAGGACAAACTGATAATATGAAAAAGGAGGAATATGAAATTGACAAAATTAAAGAAGAAATTGAATCTTTGAAAAGGGAAATTAAATTCCTTACTACACATGGATTAAAGAAGCATATTTTTATGTACATTAGAAAAGTGAGTGGCATTGCAAACGGATTGGAAACTGATTTACAAAGAATGATAGCTACATTCAAGAACATTGAACTTACTTTTCAAGAAATCGATGTATCTATTTTTGAACCAATGGCAAAAGTACGTGTAAAAGAACATCCATGTTCTGTTACATACACATCTTCAAAACAATTACAAGCTCAATTACCATTGCGAATGACAGCAGATATCAGCACTTTTAAACTGAGAGAATCAATTCCATTTCATTTTAAAAAGAGAATTACAAGCATATCTTTCACAAGGGACAATAAATTGCTGTTATGCGATTGCCATAATCATCAAATAATTGTGTGTGATGAAAAATGTCAAATCATACAGGGGCTGTATGTTGATATGCAGCCATGGGATATAACAGTAATTCAAACAAAACAAAAGGCTGTTGTAACATACTTTTCAAATATTATACAATTTTTAGACACAGACAAAATGATTGTTGATAGAAAACTTGATGTTGGTGCAACGGTAGGAGGTGTCGGCTCAACAGCAGAACATATCTTGCTGGGTGGTGAAAGTGTCATTATTGTTTTAGACACCATTGGTAACTACTTACGTACTATACCATTTAAAGGATGTACCTTAAGTAAAATTAGCTACATTCATGTTGGCCCCAAAAATAGATATTATTGTTGTGATTCACGGAAGTGTGTTTGTCTTAAATCAAATGGCGAGTTAATTTTCTCATACAGTATCCAAGGGGAATCGCTTCATAGTACGTTAGAAACTGACCGTCGGGGAAACGTGTACATCGTCGGCAGATCTACCGGTACAGTAGAACGACTACGTCCCGATGGTAAATTAGATCGTGTTATGAATAATGGTATGCGAAATGTTAAAAGTGAAACCGTGAAGGTTGATGGGAAATCTAACGAAGGAAACAATGAAAGCTGCAAGAAATCCATATTCATGACGTTATTCTTTACAGGGTGGATATTCGTTATTGTGGAAAAATGCGTATCCGGACACTGGGAAATATTGACGCTGCCTCGATTTACGGGTTACAGTTACATCGACTTGGATGCCACGCTCATTGTTTTTGGATGGTTTGGTGTCCAGTGTGTACTATATGTTCTTCCTGTTGGTGGAGAATTAGTTGAAGGTCTTCCAGTTAAAGAAACTGGAGTTAAGCTTAAATACAGGTTAAATGCATTCCTCGTTCTTACTCTCAACATCTTAGGATTACTAGCAGCCATTGTATCGGGTTTTAATGTGACAATAGTATCAGATAAACTTCTACAGATGGCCACTTCCGGTGTTCTGTTGGTCATTTTGTTTAGCATTATTTTGTTTATTAAAGGAGACAGCAGTAACAACTCAGGTAATAGATGA

Transcript

Bpl_scaf_13642-4.27

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01222	ERG4_ERG24	Ergosterol biosynthesis ERG4/ERG24 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001171	Family	Sterol biosynthesis ERG24/DHCR-like	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR011044	Homologous_superfamily	Quinoprotein amine dehydrogenase, beta chain-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21257	DELTA(14)-STEROL REDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005637	Cellular Component	nuclear inner membrane	Interproscan
GO:0006695	Biological Process	cholesterol biosynthetic process	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016126	Biological Process	sterol biosynthetic process	Interproscan
GO:0016627	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors	Interproscan
GO:0016628	Molecular Function	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0050613	Molecular Function	delta14-sterol reductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_13642-4.27 global RNA-seq network