| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13697-0.47 | AP ENDONUCLEASE | Bpl_scaf_13697 | 31328 | 38066 | + |
| CDS | |||||
| Bpl_scaf_13697-0.47 | |||||
| Transcript |
| Bpl_scaf_13697-0.47 |
| Protein |
| Bpl_scaf_13697-0.47 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03372 | Exo_endo_phos | Endonuclease/Exonuclease/phosphatase family | Domain | Interproscan |
| PF06839 | zf-GRF | GRF zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004808 | Family | AP endonuclease 1 | Interproscan |
| IPR005135 | Domain | Endonuclease/exonuclease/phosphatase | Interproscan |
| IPR010666 | Domain | Zinc finger, GRF-type | Interproscan |
| IPR036691 | Homologous_superfamily | Endonuclease/exonuclease/phosphatase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22748 | AP ENDONUCLEASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0003906 | Molecular Function | DNA-(apurinic or apyrimidinic site) endonuclease activity | Interproscan |
| GO:0004518 | Molecular Function | nuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006284 | Biological Process | base-excision repair | Interproscan |
| GO:0008081 | Molecular Function | phosphoric diester hydrolase activity | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0008311 | Molecular Function | double-stranded DNA 3'-5' DNA exonuclease activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K10772 | APEX2; AP endonuclease 2 | EC:4.2.99.18 | Base excision repair | ko03410 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13697-0.47 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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