| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13775-0.7 | SORTING NEXIN 20, 21 | Bpl_scaf_13775 | 26820 | 38227 | + |
| CDS | |||||
| Bpl_scaf_13775-0.7 | |||||
| Transcript |
| Bpl_scaf_13775-0.7 |
| Protein |
| Bpl_scaf_13775-0.7 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00787 | PX | PX domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001683 | Domain | Phox homology | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR036871 | Homologous_superfamily | PX domain superfamily | Interproscan |
| IPR039937 | Family | Sorting nexin SNX20/SNX21 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20939 | SORTING NEXIN 20, 21 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0015031 | Biological Process | protein transport | Interproscan |
| GO:0031901 | Cellular Component | early endosome membrane | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:1901981 | Molecular Function | phosphatidylinositol phosphate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K17931 | SNX20; sorting nexin-20 | - | Domain-containing proteins not elsewhere classified | ko04990 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13775-0.7 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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