| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13988-1.12 | SUA5 | Bpl_scaf_13988 | 187911 | 200049 | - |
| CDS | |||||
| Bpl_scaf_13988-1.12 | |||||
| Transcript |
| Bpl_scaf_13988-1.12 |
| Protein |
| Bpl_scaf_13988-1.12 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01300 | Sua5_yciO_yrdC | Telomere recombination | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006070 | Domain | Threonylcarbamoyl-AMP synthase-like domain | Interproscan |
| IPR017945 | Homologous_superfamily | DHBP synthase RibB-like alpha/beta domain superfamily | Interproscan |
| IPR050156 | Family | Threonylcarbamoyl-AMP synthase, SUA5 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR17490 | SUA5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000049 | Molecular Function | tRNA binding | Interproscan |
| GO:0003725 | Molecular Function | double-stranded RNA binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006450 | Biological Process | regulation of translational fidelity | Interproscan |
| GO:0016779 | Molecular Function | nucleotidyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K07566 | tsaC, rimN, SUA5, YRDC; L-threonylcarbamoyladenylate synthase | EC:2.7.7.87 | Ribosome biogenesis | ko03009 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13988-1.12 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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