| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_13988-1.21 | ELONGIN-C | Bpl_scaf_13988 | 154516 | 168977 | - |
| CDS | |||||
| Bpl_scaf_13988-1.21 | |||||
| Transcript |
| Bpl_scaf_13988-1.21 |
| Protein |
| Bpl_scaf_13988-1.21 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03931 | Skp1_POZ | Skp1 family, tetramerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001232 | Family | S-phase kinase-associated protein 1-like | Interproscan |
| IPR011333 | Homologous_superfamily | SKP1/BTB/POZ domain superfamily | Interproscan |
| IPR016073 | Domain | SKP1 component, POZ domain | Interproscan |
| IPR039948 | Family | Elongin-C | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR20648 | ELONGIN-C | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0030674 | Molecular Function | protein-macromolecule adaptor activity | Interproscan |
| GO:0070449 | Cellular Component | elongin complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03872 | TCEB1; transcription elongation factor B, polypeptide 1 | - | Ubiquitin mediated proteolysis | ko04120 | PMID: 28812709 |
| HIF-1 signaling pathway | ko04066 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Renal cell carcinoma | ko05211 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_13988-1.21 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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