Gene detail

Detailed information of Bpl_scaf_14513-1.13 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_14513-1.13	BROMODOMAIN CONTAINING PROTEIN	Bpl_scaf_14513	73223	109236	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_14513-1.13

ATGAACGAGGGAGACTTGCTGTCAATGGCAAGTGCGCAAAGAAATCAGGTTGCAAATTTGAATGGAGGCGTGTGTAAATCCGAGACAAAATCGGACATGGTCATGGACATGTTGGACCGAAATGAAAGACCTGACAAGGAGCCACTCAGACTAGTTTTAAAAGTTGGTGAGTCTGTCAGTGCACATAGTCCTCATCATGAGAGTAAGAAACACAAACACAAGAAAAAGAAGAAGAAGAAGTCAAAAGATAGAGACCATCATCACAGAGAGGAGGAGAGACCACCAAAACGGCATCATGTGGAGGAGACAGAAGAAGAAAAGGAAGTTTCTCAAGCAGACGATGAAGATGAAAACTTGGCAACCAAGCCAACAGTAGACATTGTAGAGTCTGACGATACTGAACACGATGATGTAGAAGTACCACCTCCTCAAAGACCACAGGAACAGTCCATGATGCTAACACCATCAAAAGGAGATGATGAACATGGGGTGTTACGGATTTGTTTAAAATACCTACATAAGAAAATGCAATCGAAAGATGTGAATGGATTTTTTGCTTATCCAGTTAATGACATGATTGCCCCTGGGTATTCCCTCATTATAGCCAATCCAATGGACTTTAGTACAATAATGACAAAGATTGACTGTGATCAATATAATAATGTTTTGGAATTTAAGAAAGATTTTGTCCTGATGTGTAATAATGCCATGCATTACAACAGACCAGAGACCATTTACTACAAAGAGGCAAAAAAATTACTCCACATTGGTATGAAGTCTATGAGTAAGGAAAAACTGTTAGTAATGAAGAGGACTCTACCATTTATGGCCAGTTTACGTTATGAAGAACTGGGTATAAATGAACCAGACGAAACTAAAGCTGTAATGGAGGCCATCGTAGAGGAAGAGAAGGAACAAAAACAGAGAGCTAAAGATAGAGAAGATATTGGTAGGTTTGAGGCTGTTCCTGATAATTTGAGTGCTGCTGAGATTTTATCCCAGGTACAGTCTGCTGCTAAAGATGCCGCTGATATGTTGACCATGAGACAGCAAAATTGTAGGTTTGGATTTCTGAGGAAGAGAGAAGATGGCAGTACATCAATGACATTGTTAAATCCTGATAATGATGGAATAATAAGTAAAAGAGAGAGAGTGATCAATATAGGTAAACTGGTTGGTAAATTAGGGTCTGGTGGTGCTACATTAGCAGGATATAAGGAAGACAAAAGAAACAGAGTAACTCCAGGTCAATATTTAAATTATGGTCCATTTGGAACATATGCTCCTCAATATGATTCTACATTTGCCAATATGACAAAGGATGAGACAGATATACTGTTATCTACTTATGGTGATGAAACTGGTGTAGGATATGCCAAGAGTGTACTGAGCTTTGTAGAGAAAGGTGGAGATTATGCTGTCAGTATGGTAGACAATCTATTGGACATTCTGACAAAAGGGGAACATGCTAAAACTAAGATGTTTCTAGAACAGAGAATGAAAGATGGAGGGGGTGATAAATCTGTGACTATCAACGGAACAGATACCAGGAAGAAGCAACCAGCTGGTAATGACAAACCCAATGTTGACTTTGATTCTCTGAGAGGTCTTAGTGATTTAGGAGTAGACATGTCATTCCTGGATAGCATGGAAAAAACTATGAAAAAAGAAAAAGATCCAGTTCAAGAAAAACTTGACCAGACTGCAACTTTAATTAATGATCTCCAACAAACTCAAAATGAGCGACTGAGTCAAAACATCCCACCACATATATCTCAAGTACCAGGACCATCTGAGAAAGAAATTCAGTTAGCACAAAAAGTAACAAAAGAATTAAAAGAACTTGCACAAGAGGCAAATCCAGGCAATATTGCGAGTGTTCAAGGCTTGCGAAACGTAATGGGGGTTTCATATACAGCAACAGATTCATCACCGTCAACTTTTATCACTAGTCAGGCTACATCACATTCAACTGTTCAAACAACTCAATCAACACCACCCGTCACCAGCCAGACAATTCCACCAGTACAGCCATCAATCCAAATCCCGGTCAACCAACCTGTTGTAGGGTCCGTAGGATCGTTACAACCGGCAGCAGTTCCGACTTTGGAGCCTACGATACCTTCAGGAACTGTCTACTCATCAAATATAATCTCACATCAAACTATTGTTTCATCTTATCAACCAACTATTGTCGTTTCATCTGCCATGTTAAATCAGCAAGCTGAATTGCTACAGCCAACTTCCATATCATATCAGACGGCAGTGGCACAACCTTCAACATCTATACCTTTTCAACCGACTACAGTTAATACCTTAAATCAGCAAAATCAGCAAATTACGGTCGGAGATATGAGTGTTCTTGGACAGGGTATACAAAATATCCCCGATATGAATTCCGGAGTTTCCACGATGAATGATGACGATTCAGATATTGAAATGGACATTAGTGAATTTTTACAATTTCCAAGTAATTAG

Transcript

Bpl_scaf_14513-1.13

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439	Bromodomain	Bromodomain	Domain	Interproscan
PF12024	DUF3512	Domain of unknown function (DUF3512)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487	Domain	Bromodomain	Interproscan
IPR021900	Family	Protein of unknown function DUF3512	Interproscan
IPR036427	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR051831	Family	Bromodomain-containing	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22881	BROMODOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0070577	Molecular Function	lysine-acetylated histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11723	BRD7; bromodomain-containing protein 7	-	ATP-dependent chromatin remodeling	ko03082	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_14513-1.13 global RNA-seq network