Gene detail

Detailed information of Bpl_scaf_14980-2.6 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_14980-2.6	5'-NUCLEOTIDASE-RELATED	Bpl_scaf_14980	236190	275843	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_14980-2.6

ATGAACGCATATACATCCGGATGTAAAAAGACAGACGAGGCAAAAGGGAAATGTTACGGCGGAATATCTAGAAGAGTAACGAAAGTTAAAGAAATCCGCAGTCAATATGATAACGTAATTCTATTGGACGCCGGAGACCAATATCAAGGATCTTTATGGTTTAATATTTTCAAAGGTAGAGTAGCAGCACTGTTGATGAACAAACTGAAATATGATGCAATGACATTTGGTAATCATGAATTTGATAACGGTGTAAGCGGCCTTGTACCGTTTCTAGATAATATAACATTTCCAGTAATTAACTGTAACATAGATACCAGTAGAGAACCACGATTACAGGGTCGATTCAACAAGTCTGTTATCCTTGATGTTAAGGGCGAGAAAATTGGTGTAGTCGGTTATATTACAGATGAGACCAGCTTTCTGTCCAATCCAGGCGATACTCTAACATTTAATCCTGTCGTTGAAGCAGTACAGAAAGAAGTTAATTTACTTAAAAGCCAGGGCATCAAGATCATTATAGGATTGGGACATTATGGATATGGAAACGATCAAAAGTTAGCTGCAGCTGTAGATGGTCTGGACGTTATTGTAGGAGGACATTCACATTCCTTCCTGTATACTGGCAAACAACCTTCAAATGACGTTTCTGAAGGACCTTATCCAACCATTGTAAAAAATAAAGGTCGTGATGTGTTGGTAACACAAGCATTCTGGGCAGGGAAATATCTAGGATTTCTTAATGTGACCTTCAATGATAACGGGGAAGTTTCTAGCTGGAATGGTGACCCCATACTTCTGGACAACTCGACTGCTCAAGATGCAGACACTGAGGCTCTTCTCGATGTAATGAGACCAACCGTAGAGAAAGAGAAAGAAATTGTCGTAGGTTACACAGCGGTCTATCTAGAGGGTGATCGAAAAGTGTGTAGACTACAAGAATGTAATATAGGAAACTTGATAACTGATGCCATGGTAACTTACTATGCGTCTAGACATTCCAGTAACGATTCTTGGTCTGATAATCCTATAGCCATCATGAACTCGGGGGGAATTAGAGGACCAATTGAGCAAGGAAATATATCAAAAGGAGATGTATTAACTGTTATGCCTTTTGGTAACATGGTCGATGCATTCACTATCAAGGGGAAATATCTCAGACTAGTCTTAGAACATTCCGTAGAGAACTACGATCCAATAGATAGGCCCGGAGCTTTTCTACAAGTTTCAGGTTTACGAGTTACATATAACTTATGTAAATCATCAGGTTCACGGGTAGTATCTGTGTATACAAGATGTACTGATTGTTTAATACCCAGTTTTAAACCACTAGAAGATGAGAAAGTTTATAGTGTTATTGCACTGAATTTTGTTATCAAGGGTGGTGATGGATATACCGTTATACGAGACAACAAAATAAAACACACCGAGTTTAATTTCTTAGACAGTACCGTGTTTATAACATATCTACAAAGTCATCAACCAATAATAAAAGGTGTAGAAGGAAGGATAACTCTACTACATGACTGTGTCAATTCTGCATGTAGCGTCAATATTAATGTTTTATCAATTATTTGCATACTTTTGTTGAATATTTGTAAAACGGTTTTGTGATATTTTGAATAATTTGCACTTTTCCGACTATACTTCTAAAATTATACGTTTTACATGGGGTTATTTACCTTTGATGAGTTATTTTTACCTTTAATACAAAGTGTAATGAAAATAACTTATGAATTTTCAATTTGCTATAGAATAATATCGCCTGATTTCCAATATCTACAAATTATATATGAAAAAAATTATACTCAAATTCGTAATCTATTCCATTGCTTTTGTTAGACCGGATACCAATTTGTACGTCGTAAGGGAAAGAACTCGTATAAAAAATTCATCAAAACGTATATTTTTAGAATCAAATCGGAAATATGCAAAAAGTCTAAAATATCTGATCTCGTTTATAGCATCAAGAAATCCACGTGTTTATTCTTATGATTTAGGTTTTGTGATTCGTTTAATTGCTTTCAGAAGCAATGTAGATAGTTTTACAAATGTCTGAAATTAAGACATGTGTTTTCATGGAAATTTTAATGAAAATAAATATACCATCGGAGTTAAGACTCGAGTAACTCTCATGCGACTTCAGACCAATTACACTTGTGGTTTTGAATAGCAATAAGGGACTAGAAACATTCTGTAAACAAGAGATCAACTATAGAAAGCAACTTTCGAATTTTTGCTCAGAACCAGTTTATTCAAAAGCACAATTTTGATTGGTTTCACTTCACTTGAGAGTTACTTCCAACTCTGGAACATAGCAGGTTTGAAAAAAGATGTAACCGAACAAATCCTACTAAATTTGAGAAATCCAATTGAACACACACAAAAGGTGTATGGTATTGAATTATGTGATGCATTAGTCCTAATGACTTTTAGTTTAGTTTTTTATGTTTGAATTTAAGTCAAGTCGTAACTCGAATTATTGCTAGCCATTAATACTAATGCATAGCCTCAATTCAAATTTAGCATAACCATAAGCTATTTATGATTAGCCTTAATTCGAAATATGGCTAAGTCATTCATTTATTTCCTTCATTTAACCTTTGGTTTAGCATAATTAATTATGGCTGACATCGATAATGATAGGCATAGATAATTATGACCAGCCATAATTCCATTTACAGATCAACATTATTATTTATTTTAGACCCTAATACCACGACATGGATATGTTAAAATACCAAGCTATTAGTAATACTAATAGCCTACTAATAGGTACACTAGCATTGCGTACAAAAGGGGTAATTACATGAATCTCAACTATTTTATATACTTATAGTATATCTATTAAGTTTGATTTGTCATGTCTTATCATTTACCGT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan
PF02872	5_nucleotid_C	5'-nucleotidase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR006179	Family	5'-Nucleotidase/apyrase	Interproscan
IPR008334	Domain	5'-Nucleotidase, C-terminal	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR036907	Homologous_superfamily	5'-Nucleotidase, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11575	5'-NUCLEOTIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006196	Biological Process	AMP catabolic process	Interproscan
GO:0008253	Molecular Function	5'-nucleotidase activity	Interproscan
GO:0009166	Biological Process	nucleotide catabolic process	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19970	NT5E, CD73; 5'-nucleotidase	EC:3.1.3.5	Purine metabolism	ko00230	PMID: 28812709
			Pyrimidine metabolism	ko00240	PMID: 28812709
			Nicotinate and nicotinamide metabolism	ko00760	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_14980-2.6 global RNA-seq network