Gene detail

Detailed information of Bpl_scaf_15034-5.12 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_15034-5.12	BONUS, ISOFORM C-RELATED	Bpl_scaf_15034	483958	511448	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_15034-5.12

ATGAATATCAACAAAAATGGGTTTCTGTTGTGTCCCATCTGTGAAAAGGAATATGACGACAGACGAGGAGCACCACGTGTACTCCCATGTCTTCACACGTGTTGTTCCACATGTTTGCAAGATCTCCTCAACGACAATGAATTGATCTGTCAGGAATGTCAAACTCAATTCGACAAAACCCTAGACGGAGTTGAGGCCTTCCCATTAGACACTGCCATTAGAAATTATTTGGATTTTATTCGAGTCCAACTTCGACCTACAGAGGTTCCATGCACTGACTGCCCAGATGAAGCAAATGCGCAAGCATTTTGTCGGGACTGCTTCCTGTTTATGTGTGTCGAGTGTACACGTGCACATAAAAGAACGCATGTTACAAAGAAGCACATTTTAGCATCTATAGAGGACATGAGAGAATCGGATCTCCGGGATTTTCACAGGAAAGACACATGTCAAACAAAAGGACACGAAGACCAGATATTTACTTTTTATTGTGATAAACGTGGTTGTGACGTCCCAATATGTACACTCTGTGCTGTCTCAGATCACAACCAACAACACGGACATATTATAAGGAATCTAAGCGATGTGTATGAGGATAGCAAGTCGACTGTCGGCAGCGTTATTCGTGAAATCAACAACAAAGGGAATCCCATGGCAGAATCCGTATCACAAATTGAATCGATAGTTTACGATCTGACAGAAAAGGAAACTGAAATAAACAATGAAATAGATGTAATATTTGATAGATTCCACAAAGTGTTAGAAGACAGAAGAGAACGTCTGCATCGAGAAGTACAAAGTCATTGTCAGTCTAAAAAGAGGGAACTACAGGAAAAAGTTTCAGAAATGAAGAGCTACTCAACTAATGTGAAGACAGCCGTTGAATTTGCAAACAGGGTAATGTCCTATACCACTGCATCCGAGTTTCTTATGTTAAGAGACATTCTACTCAAGAGAGTACTGGAGTTGAAGAATCATTCTGTTTCTGTCCCGGCGAAGGACGATAATTCTTTAAAGTTTTATCGGGGAGCAAGCGATGAATCTTTTTGTCAGTTGGTTAATGTCATTGGGAATGTAGTCACGAAGAATATACCCAAGTCTCCTGAAACTCTCAACTCCAGTTTTCAAAGTGAGAGCTATAAGAACTCAAAACGAAGCAGCTTTAGTGATTTTCAAATTGAATTACAGTATGATTTTAATAGTATAAATAGTATCCACAATTCTCCTTCAAATGAATACCAAGGCCCAAAAGGTGGCAGTATCAATGACTACAAGTCTCCAAAAAGTGGATACCAATCGCCTCCAAAACGACACACACCAAACGGTCCACAATCTATGAAACCGATACCTAATGTAAGAGGTGACGACTACGAGAGTATAAAACCAAATATTCAGCCACAGTATTATTCCCCAAAACAAAGCAAACCAACCGATTACCGTCTACCTGCAGAAAACGAGAGGGGCGTTGTGCAGCTGGAATCTAGACAGAGTGGTACTCCAGATTCAGAATTTGAGACTGCTCGTAATGAATTGAGAAACGCTGCAAAAACTATGAAGGAATCAAAGTTCATGCCTATTGTAAATGGAGTAATAGAATCATCCCCGAGTGAAGAAAAACCGAGTTTTTTCAGTCGCCACCTGTCAAGTCCTCCTGAAAACATGCATGTCATATCATCAGACAATGTTGAAGGGGAAATATCACCAGACTCACAGCGGGAGATAATCATACACCAAGCAGGGCTTAGTGACTGTCTTCAGAAAAACCAGAGTGCAAAATTAAAGGAAAAGAGTGTTGAGGAAAAGAGTACATCACAGAGCACAGAGACATCTTTTGTTCCTATAGTTTCCCCTCGGATCAAGAGACCCTCACAGGAGGCTGGTGAAGACAACAGAGTGTTCATAAAAAATGGACATTCTGACGGTCAACCAAAATCAGGACCAGCTATTTTCAATGATGTCACATGCCCAGACTTTTCCTTTGACGTCCTGACAGTTCATGAGGAAAGAGAAGTATCCATCGATGGTAAAACATTACGTAACAGAAAAACTGGAAATCCATCAAGTAGTACAGTGGTAGGACCAAAACAGCTGAAACAATACAAAGGAATCATTGGAAACTACTCCTTTCAGCAACCTGGTAAATTCTACTATGAAGTAGATATCTCCTTCAACATCATTCAGCCATTAGAACAGACATGGCTGGTATTCGAACTGGGCTTGTGTAGGAAAGATGACGTAGACAAACACCATACTGTAGAACGACATGAATTCTCACGTTCGTTCTATGTTGCTCGTTATCCAGAAGATGGAAAGTTGTCACAAGAGTTTTGGCATAATCGTGATCTGAAAGCCATCATCCCACTTTGCGACAACAGCCCTGGCCTAACAGTAGAAATGACGTACGGCATGCTGATCAATACGAGCACTGGTAGATTAACGATAGCAGACGTCAAGAGAGAGAAGAAGATCTATACATTTACGGAAATTGATTTCTCCCAGCCATTATTTCCTGTATTCGGGACTTATAATTCTGACCTTGTCAATGTCATCATGAGGTTGCGTTCGGGAGGTACCCTATCATCGTTCCCGCCATTTTTGAAAGGAAGTGATCCGTTAGAAAGTCCAAGGAAGTCTGACCCATTTGATTCTGATCACAGACTACCGGCAGAAAATGAAAAGGGTATGATACAACGGCAGTTCAGCATGCCAACGAGAATGACGGGCAGTCAGCAGAACATATTGTCACCAAGATCACCCAGACAAAATATGTCTAGAAGCTCGGAAAATATAAACGAAGCATCAATTGACACTGCCAAAAATGGTCTGAGGAATACGGTTGTTAAGCCGATGAAACCATCTAAGTTTGTTCCCGTTGCTAACGGAACATGTTCGCCAAGAGACAAGCCGCAAAGTTTCTTCAACAGAGCAAGAAGTCCTCCGACGGTCAAGACTCAGCCCGTCCCCGGGAAATTGCGAACAGCAGCATCGACATCACAGTTAGATACGATTTCCCGACCCATGGGGCTTGGAGACTTTATGAAGGAACTTGAAAGAAGAGGAAACTTACCAAAACCGGTACAACCACCTGAAAGAAGCTTGAGTCAGACTGGAGAAAAATCATTTCAGCCAACATCAGAAAGATCGTTTAAACCAATCACCTCGCCATTGAATCAGCGGTCATCTTTGTTCATGAAAAACACCAGTTCAGATGAGACAAGAACAGGACCAGCGACATATAATGATGTGAAATGTCCAGATTTTAGTCTCGATATTGACACTTGTCATGACGAAAGAGAGGTGTCGGTCGACGGCAAGACTTTGAAAAACCGTAAAACTGGGAAACCGTCATCGGGGAACGCCAGCAGAAAACTCAAACAATACAAGGGAATTCTAGGGGAACTATCGTTCAAAGAAGAAGGCAAATATTACTTCGAAATGGTAGTAACATTCAACATTATCCAACCACTTGAGCAGACGTGGTTAGTATTCGAAATTGGGCTATGTAGAAGGGAAGACGTTGATAAACATCATACTGTCGAACGCCACGAGCATGCGCGGTCATTTTACGTTGCAAGATATCCGGAAGATGGAAAGTTAGCTCAGGAATTTTGGCACAATCGGGATCTTTTAGCGTACGTACCATTAAGCGAAAATAAAGCTGGGTTGACAGTGGAAGTTACGTATGGAATGGTGGTGGATACAAAAAGAAAGAAGTGGATCATTGCTGATGTCAAGAAGGAAAAGAAACTCCATACTTTCTCAGGAATTAATTTTTCCAAACCATTATTGCCAGTGTTTGGAACATACAATCCTGATCTTATCAATGTCGAGATGAAATTAAGATCTGGTACACAAATTACGGCATTTCCGCCATTTCTGAAAGGACTGTAG

Transcript

Bpl_scaf_15034-5.12

TATATACAAGGGCTTCATTGTACCGTGATAAAATACTACTGAACATTGAATACAAGCCGAACACTTGATTCAGCTCTATCGGAAAATATATCTATCACTGAAATATTTGTCGTCAAATACCGTAGATAGTTAAAATGTATCCATGTTGATTTGGGAAGTTGCTTTTAAAAGGTGAAAGATGAATATCAACAAAAATGGGTTTCTGTTGTGTCCCATCTGTGAAAAGGAATATGACGACAGACGAGGAGCACCACGTGTACTCCCATGTCTTCACACGTGTTGTTCCACATGTTTGCAAGATCTCCTCAACGACAATGAATTGATCTGTCAGGAATGTCAAACTCAATTCGACAAAACCCTAGACGGAGTTGAGGCCTTCCCATTAGACACTGCCATTAGAAATTATTTGGATTTTATTCGAGTCCAACTTCGACCTACAGAGGTTCCATGCACTGACTGCCCAGATGAAGCAAATGCGCAAGCATTTTGTCGGGACTGCTTCCTGTTTATGTGTGTCGAGTGTACACGTGCACATAAAAGAACGCATGTTACAAAGAAGCACATTTTAGCATCTATAGAGGACATGAGAGAATCGGATCTCCGGGATTTTCACAGGAAAGACACATGTCAAACAAAAGGACACGAAGACCAGATATTTACTTTTTATTGTGATAAACGTGGTTGTGACGTCCCAATATGTACACTCTGTGCTGTCTCAGATCACAACCAACAACACGGACATATTATAAGGAATCTAAGCGATGTGTATGAGGATAGCAAGTCGACTGTCGGCAGCGTTATTCGTGAAATCAACAACAAAGGGAATCCCATGGCAGAATCCGTATCACAAATTGAATCGATAGTTTACGATCTGACAGAAAAGGAAACTGAAATAAACAATGAAATAGATGTAATATTTGATAGATTCCACAAAGTGTTAGAAGACAGAAGAGAACGTCTGCATCGAGAAGTACAAAGTCATTGTCAGTCTAAAAAGAGGGAACTACAGGAAAAAGTTTCAGAAATGAAGAGCTACTCAACTAATGTGAAGACAGCCGTTGAATTTGCAAACAGGGTAATGTCCTATACCACTGCATCCGAGTTTCTTATGTTAAGAGACATTCTACTCAAGAGAGTACTGGAGTTGAAGAATCATTCTGTTTCTGTCCCGGCGAAGGACGATAATTCTTTAAAGTTTTATCGGGGAGCAAGCGATGAATCTTTTTGTCAGTTGGTTAATGTCATTGGGAATGTAGTCACGAAGAATATACCCAAGTCTCCTGAAACTCTCAACTCCAGTTTTCAAAGTGAGAGCTATAAGAACTCAAAACGAAGCAGCTTTAGTGATTTTCAAATTGAATTACAGTATGATTTTAATAGTATAAATAGTATCCACAATTCTCCTTCAAATGAATACCAAGGCCCAAAAGGTGGCAGTATCAATGACTACAAGTCTCCAAAAAGTGGATACCAATCGCCTCCAAAACGACACACACCAAACGGTCCACAATCTATGAAACCGATACCTAATGTAAGAGGTGACGACTACGAGAGTATAAAACCAAATATTCAGCCACAGTATTATTCCCCAAAACAAAGCAAACCAACCGATTACCGTCTACCTGCAGAAAACGAGAGGGGCGTTGTGCAGCTGGAATCTAGACAGAGTGGTACTCCAGATTCAGAATTTGAGACTGCTCGTAATGAATTGAGAAACGCTGCAAAAACTATGAAGGAATCAAAGTTCATGCCTATTGTAAATGGAGTAATAGAATCATCCCCGAGTGAAGAAAAACCGAGTTTTTTCAGTCGCCACCTGTCAAGTCCTCCTGAAAACATGCATGTCATATCATCAGACAATGTTGAAGGGGAAATATCACCAGACTCACAGCGGGAGATAATCATACACCAAGCAGGGCTTAGTGACTGTCTTCAGAAAAACCAGAGTGCAAAATTAAAGGAAAAGAGTGTTGAGGAAAAGAGTACATCACAGAGCACAGAGACATCTTTTGTTCCTATAGTTTCCCCTCGGATCAAGAGACCCTCACAGGAGGCTGGTGAAGACAACAGAGTGTTCATAAAAAATGGACATTCTGACGGTCAACCAAAATCAGGACCAGCTATTTTCAATGATGTCACATGCCCAGACTTTTCCTTTGACGTCCTGACAGTTCATGAGGAAAGAGAAGTATCCATCGATGGTAAAACATTACGTAACAGAAAAACTGGAAATCCATCAAGTAGTACAGTGGTAGGACCAAAACAGCTGAAACAATACAAAGGAATCATTGGAAACTACTCCTTTCAGCAACCTGGTAAATTCTACTATGAAGTAGATATCTCCTTCAACATCATTCAGCCATTAGAACAGACATGGCTGGTATTCGAACTGGGCTTGTGTAGGAAAGATGACGTAGACAAACACCATACTGTAGAACGACATGAATTCTCACGTTCGTTCTATGTTGCTCGTTATCCAGAAGATGGAAAGTTGTCACAAGAGTTTTGGCATAATCGTGATCTGAAAGCCATCATCCCACTTTGCGACAACAGCCCTGGCCTAACAGTAGAAATGACGTACGGCATGCTGATCAATACGAGCACTGGTAGATTAACGATAGCAGACGTCAAGAGAGAGAAGAAGATCTATACATTTACGGAAATTGATTTCTCCCAGCCATTATTTCCTGTATTCGGGACTTATAATTCTGACCTTGTCAATGTCATCATGAGGTTGCGTTCGGGAGGTACCCTATCATCGTTCCCGCCATTTTTGAAAGGAAGTGATCCGTTAGAAAGTCCAAGGAAGTCTGACCCATTTGATTCTGATCACAGACTACCGGCAGAAAATGAAAAGGGTATGATACAACGGCAGTTCAGCATGCCAACGAGAATGACGGGCAGTCAGCAGAACATATTGTCACCAAGATCACCCAGACAAAATATGTCTAGAAGCTCGGAAAATATAAACGAAGCATCAATTGACACTGCCAAAAATGGTCTGAGGAATACGGTTGTTAAGCCGATGAAACCATCTAAGTTTGTTCCCGTTGCTAACGGAACATGTTCGCCAAGAGACAAGCCGCAAAGTTTCTTCAACAGAGCAAGAAGTCCTCCGACGGTCAAGACTCAGCCCGTCCCCGGGAAATTGCGAACAGCAGCATCGACATCACAGTTAGATACGATTTCCCGACCCATGGGGCTTGGAGACTTTATGAAGGAACTTGAAAGAAGAGGAAACTTACCAAAACCGGTACAACCACCTGAAAGAAGCTTGAGTCAGACTGGAGAAAAATCATTTCAGCCAACATCAGAAAGATCGTTTAAACCAATCACCTCGCCATTGAATCAGCGGTCATCTTTGTTCATGAAAAACACCAGTTCAGATGAGACAAGAACAGGACCAGCGACATATAATGATGTGAAATGTCCAGATTTTAGTCTCGATATTGACACTTGTCATGACGAAAGAGAGGTGTCGGTCGACGGCAAGACTTTGAAAAACCGTAAAACTGGGAAACCGTCATCGGGGAACGCCAGCAGAAAACTCAAACAATACAAGGGAATTCTAGGGGAACTATCGTTCAAAGAAGAAGGCAAATATTACTTCGAAATGGTAGTAACATTCAACATTATCCAACCACTTGAGCAGACGTGGTTAGTATTCGAAATTGGGCTATGTAGAAGGGAAGACGTTGATAAACATCATACTGTCGAACGCCACGAGCATGCGCGGTCATTTTACGTTGCAAGATATCCGGAAGATGGAAAGTTAGCTCAGGAATTTTGGCACAATCGGGATCTTTTAGCGTACGTACCATTAAGCGAAAATAAAGCTGGGTTGACAGTGGAAGTTACGTATGGAATGGTGGTGGATACAAAAAGAAAGAAGTGGATCATTGCTGATGTCAAGAAGGAAAAGAAACTCCATACTTTCTCAGGAATTAATTTTTCCAAACCATTATTGCCAGTGTTTGGAACATACAATCCTGATCTTATCAATGTCGAGATGAAATTAAGATCTGGTACACAAATTACGGCATTTCCGCCATTTCTGAAAGGACTGTAGATGTTGATGGCTACTTCAATTAGTTATTTATTATTGCATATGACGATGTACTTGCCAAAGTAGTGTGCCATTTGTATACAAACTTAAAGAGTAAGATGTCTAGATAGACTCAGTGTTTAGGATATCAGCTATATACTAGATTTCTAGTGAATAACCATAGATTTATACCATCATTAGGAATGTTACGTAAATTTGTGATTAAGTAGATAATCATTATCTACATGTTTATCTAAACCTGCTTTGTGGAATGCCGCCTAGAATGTTTTAGCCGATTCTATGTATGAATATCGTCCTGTTTGTTAGGCTTGTATCAACAAATCATTCATAAAAATATGTATAGTATGGTAAATTAGCTAGTAAAGCAAGTTAGTGAATTCTAAATTAACAATTTCTTCTGCACATTGTATTAATATGTTGAATTTAATACTGTGATTTCGGCCAATGCATTTATATTTATTTTGCATTTATTATTTACAATTATTTATTTGATGTTTATAACATTGTTTATTTTATAATGTTACATTTTTTGTAACATTGGAAGTATATTTTTCTTATATTGATCCGTCTGACATACATAATTATTATAGGTATGTTAGTGGACATTTTTGTTAAGCTATGAATGCCAAGTATAGTATGAAGTATTGAATACCGTATGCATTAATAAGTTAGTGTGAAGATAAAATGATAAACAAAAGATACCACACTGTCGGACCAGTTCCAAAATCCAATCGAATAATCGTAGAAACAGTAAGAAAATCGATACATCTAACACACATACATAATCACCAACTTTCCTGGTTTGGGACAGGCAATTCAATAAAAAGTGACGGGGTTAATCTAGTGTGTATTTGAACATGATTTGCAAAGATTCTTGCAAATGAACAAAAGTGTACTTGTCTTATTTTTTTTAAATTAGAAAGTTCAATATATTCTATATAAAGCTGTAGCTTGGACTTTTGTAGTTTGTAAAAGTACATATTCCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000315	Domain	B-box-type zinc finger	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR001870	Domain	B30.2/SPRY domain	Interproscan
IPR003649	Domain	B-box, C-terminal	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR047153	Family	TRIM45/56/19	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR25462	BONUS, ISOFORM C-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08883	TRIM33, TIF1G; tripartite motif-containing protein 33	EC:2.3.2.27	Protein kinases	ko01001	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_15034-5.12 global RNA-seq network