Detailed information of Bpl_scaf_15951-10.18 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_15951-10.18ATP-BINDING TRANSPORT PROTEIN-RELATEDBpl_scaf_1595110204371040546-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00005ABC_tranABC transporterDomainInterproscan
PF00037Fer44Fe-4S binding domainDomainInterproscan
PF04068RLIPossible Fer4-like domain in RNase L inhibitor, RLIFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003439DomainABC transporter-like, ATP-binding domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR007209DomainRNase L inhibitor RLI-like, possible metal-binding domainInterproscan
IPR013283FamilyRLI1Interproscan
IPR017896Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR017900Conserved_site4Fe-4S ferredoxin, iron-sulphur binding, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR034348DomainRLI, domain 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR19248ATP-BINDING TRANSPORT PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000054Biological Processribosomal subunit export from nucleusInterproscan
GO:0005506Molecular Functioniron ion bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0006415Biological Processtranslational terminationInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043024Molecular Functionribosomal small subunit bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06174ABCE1, Rli1; ATP-binding cassette, sub-family E, member 1-Ribosome biogenesisko03009PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_15951-10.18 global RNA-seq network
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