Gene detail

Detailed information of Bpl_scaf_17035-1.9 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_17035-1.9	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31	Bpl_scaf_17035	192761	201166	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_17035-1.9

GACAAGTCCTAAAAAGTTATGGCAGCTGCCAGACAAAATTCTGGACAGGAGTCTGAAGACAGAGTAAGATTCCAGACAGAGTTAGAATTTGTTCAATGTCTAGCAAACCCTAATTATCTTAACTTTTTAGCACAGAGAGGATATTTCAAAGACCAGACGTTTGTTAACTATCTAAAATACCTTCAGTATTGGAAGGATCCTAAATATGCCAGATATCTGAAGTATCCACAATGTCTTCATTTCCTTGAACTGTTACAGTATGAACATTTTAGAAAAGAACTTGTGAACGGACAATGTACAAAGTTCATAGACGACCAACAATTACTTCATTGGCAACACTACCAACGTAAACGGATGAAATTGTTGATGGATGAAGCAGAACGTCATATACAAGACCAAAAAGATAAAACAAGCTGAGATTCTGTCATGGTGATAATTCAAGTAGAAACATGACTGAACGTATGAGGAATGTACTATTCCTTTTAGAAATGTGTACGAATGATAGATATGAAGCTATTCGAGATCTCAATGGATTAAATCATGGAATATATGGAAAAACAACAGTGACAAGGTCCAAATGTATTTACTAAGGCCAAACAAAAGTGATTGTTGGTTTTCCATAACATAGGGAAATTTTTAAGGGCTGGCAGACAGGGTTTTCTTTTTTTTTTTTTTTTTTAGCTCAAGAGATATTGCAAATCAGGGTTTTGTTATCTTTCTCATGAAGGTCAGAAAATATATCATAAAGGTAAAAAAAATTGCATCACTCTTGTTTCGTTTGATGCGAACATTTCTGTAAATGAACAGCCAGAATGGTTCCACTGGGCACTCCGCCGGTGGCCATTTTATACACACTGTACGTCACGTACACATTTTAGATCATGGTCCTTTTTACTGATATCGCAAGCGCTTTGGCGATCTAGATCAATGACCTTGACAGGTGGAAAAAACATCGAAAAAGCATGGCTGCACTTTATCTCCGCAACTTTTGAAAATATCTGTAATTGTTTACGATAACAAAAATCTCCATATTACTGAGTTAGAAGACACACGGCCGGTGTTTATTTTATTTTATTTTATTTATCAGTAATAAAATATAACTACCCGGCAGTAAAAATTGACCCGGTCGGGTTAGGGGAAACATACAATCATTTTTCTTTGGCCTAATGTTCCACTGGTAAAAAGTGAATTTATGTTCCATGTCAATTTAATTTGTTTAGTCAAATTAGAATAAGGCCATCCATCAAGAAAATACTAATTTGCTGTTTTCTGACAGACCCAATAAATTGGCCCTACCTCAAAAAATGCATAAAGAGTTTGAAAAAATAGACTTTTTCAGCATGTTTTTACTTAGATAATGCATCTTTTGGAATCTTTTGGGGAAAAAATAGCCTACCTACCTACTTACACACCTTGCAAATTGTGGGTCGAAAAACAGTAAACCAACTTTTTTTTAAATCATATATTTAAACAAGTAATAGTTAATGGATGTATTAAAATATAAATAAAAATCCTAGAAAATTGACCTATGAACCTGATTATCAATGTATGTACTGTACATATTAATAAGTCTATATAGTTATATAATTAGGTACTTGACCTCTGACCCTGATGACTGAAATACGTGTATAGTGTATAGTTTGAAGTATCGTCAGATATTGTAAGACTTGTTTTTGTGAGACTTTTTGTGTTGTTTTTGTATCCCTCAAAAATCTTTTCTTGGCCACTCTACATTCAGCTTGTCAAGTCAAGGGTTTATATATCCTTCCTTTGCCCAAAAAATCTCTTACTAAGGTAATCAGCATTCATCTTGTAAAGTCCTGTAAGGTAATCAGCATTCATCTTGTAAAGTCCTGTAAGGTAATCAGCATTCATCTTGTAATGTCCTGTGGTGATTATTTACTGGTAGTTCACATTTTTACATTGGGTGTTTCATGATATAGTACTGTATTAATTATGTTAATGTTAGAAAGGAGTTAAGTAAACTTATTTGAAGAATAGGTCATTTGATTATGTTAGTGACACTAGTAGTGTCACAGATGTTTTGGGTCCAGTCAGTACAATAGATATTTCTCTCTACTTTACATAATTATTGGACTGCATGTTTGTTTAATTACTAGAATTCCAATAATGAAGAATTTTAGTATTAAAAAAAATAATAAGTTCTTAATTTTAATTACATTTGTACTTTGAAAATGTTTTCATAAATCTCTCGTTTTCCATAAATTTGTTTCCAGTATATGTGCTAAAAATAGTTAATTGGTGTTCAATATGATGAAAAACCAGGTTACCTGACAGTAGGTACCAGTTACATACAACACAATTACATGTATTTTCTATGAAACTTTGTTGTCAATAAATAATGTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05669	Med31	SOH1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008831	Family	Mediator complex, subunit Med31	Interproscan
IPR038089	Homologous_superfamily	Mediator of RNA polymerase II, subunit Med31 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13186	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003712	Molecular Function	transcription coregulator activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016592	Cellular Component	mediator complex	Interproscan
GO:0070847	Cellular Component	core mediator complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15153	MED31, SOH1; mediator of RNA polymerase II transcription subunit 31	-	Transcription machinery	ko03021	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_17035-1.9 global RNA-seq network