| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_17187-2.9 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED | Bpl_scaf_17187 | 181412 | 205697 | + |
| CDS | |||||
| Bpl_scaf_17187-2.9 | |||||
| Transcript |
| Bpl_scaf_17187-2.9 |
| Protein |
| Bpl_scaf_17187-2.9 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07522 | DRMBL | DNA repair metallo-beta-lactamase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011084 | Domain | DNA repair metallo-beta-lactamase | Interproscan |
| IPR036866 | Homologous_superfamily | Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23240 | DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0006303 | Biological Process | double-strand break repair via nonhomologous end joining | Interproscan |
| GO:0035312 | Molecular Function | 5'-3' DNA exonuclease activity | Interproscan |
| GO:0036297 | Biological Process | interstrand cross-link repair | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K15340 | DCLRE1A, SNM1A, PSO2; DNA cross-link repair 1A protein | - | DNA repair and recombination proteins | ko03400 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_17187-2.9 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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