Detailed information of Bpl_scaf_19920-0.13 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_19920-0.13UPSET, ISOFORM ABpl_scaf_199205908887028-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00856SETSET domainFamilyInterproscan
PF20826PHD_5PhD finger domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001214DomainSET domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR046341Homologous_superfamilySET domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46462UPSET, ISOFORM AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0034967Cellular ComponentSet3 complexInterproscan
GO:0035064Molecular Functionmethylated histone bindingInterproscan
GO:0070210Cellular ComponentRpd3L-Expanded complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09189MLL5; histone-lysine N-methyltransferase MLL5EC:2.1.1.43
Lysine degradation ko00310PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_19920-0.13 global RNA-seq network
TOP