Detailed information of Bpl_scaf_22762-0.7 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_22762-0.7E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDBpl_scaf_22762278042415+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF02182SAD_SRASAD/SRA domainDomainInterproscan
PF12148TTDTandem tudor domain within UHRF1DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR003105DomainSRA-YDGInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR021991DomainUHRF1, tandem tudor domainInterproscan
IPR036987Homologous_superfamilySRA-YDG superfamilyInterproscan
IPR045134FamilyUHRF1/2-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14140E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0010216Biological Processobsolete negative regulation of gene expression via chromosomal DNA cytosine methylationInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10638UHRF1, NP95; E3 ubiquitin-protein ligase UHRF1EC:2.3.2.27
Ubiquitin systemko04121PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_22762-0.7 global RNA-seq network
TOP