| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_24692-5.8 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE | Bpl_scaf_24692 | 529900 | 564053 | - |
| CDS | |||||
| Bpl_scaf_24692-5.8 | |||||
| Transcript |
| Bpl_scaf_24692-5.8 |
| Protein |
| Bpl_scaf_24692-5.8 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|SH3 |
| Ubiquitin Family | UBD|Alpha-Helix|VHS |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00018 | SH3_1 | SH3 domain | Domain | Interproscan |
| PF00790 | VHS | VHS domain | Repeat | Interproscan |
| PF04963 | Sigma54_CBD | Sigma-54 factor, core binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001452 | Domain | SH3 domain | Interproscan |
| IPR002014 | Domain | VHS domain | Interproscan |
| IPR003903 | Conserved_site | Ubiquitin interacting motif | Interproscan |
| IPR007046 | Domain | RNA polymerase sigma factor 54, core-binding domain | Interproscan |
| IPR008942 | Homologous_superfamily | ENTH/VHS | Interproscan |
| IPR036028 | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR050670 | Family | Signal Transducing Adapter Molecule | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45929 | JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006352 | Biological Process | DNA-templated transcription initiation | Interproscan |
| GO:0033565 | Cellular Component | ESCRT-0 complex | Interproscan |
| GO:0035091 | Molecular Function | phosphatidylinositol binding | Interproscan |
| GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
| GO:0043328 | Biological Process | protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04705 | STAM; signal transducing adaptor molecule | - | Jak-STAT signaling pathway | ko04630 | PMID: 28812709 |
| Endocytosis | ko04144 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_24692-5.8 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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