Detailed information of Bpl_scaf_36974-1.19 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_36974-1.1940S RIBOSOMAL PROTEIN S3ABpl_scaf_36974152662187052+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF01302CAP_GLYCAP-Gly domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000938DomainCAP Gly-rich domainInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR036859Homologous_superfamilyCAP Gly-rich domain superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR1183040S RIBOSOMAL PROTEIN S3AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0061578Molecular FunctionK63-linked deubiquitinase activityInterproscan
GO:0070536Biological Processprotein K63-linked deubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08601CYLD, USLP2; ubiquitin thioesteraseEC:3.4.19.12
MAPK signaling pathway - fly ko04013PMID: 28812709
Necroptosis ko04217PMID: 28812709
RIG-I-like receptor signaling pathway ko04622PMID: 28812709
Osteoclast differentiation ko04380PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_36974-1.19 global RNA-seq network
TOP