Gene detail

Detailed information of Bpl_scaf_44428-3.48 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_44428-3.48	BEN DOMAIN-CONTAINING PROTEIN 3	Bpl_scaf_44428	356647	369696	+

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_44428-3.48

ATGAACTATTACCAGAAAGTTTACATGAACCAGATACATTCTAGCTCTCTGTTAGGACAGTTAGCTCAGATGTGGCGTAGTCAGATGTTATGTGATGCTCTAATCAGGACGGGGAATGTCACCACAAAGGCACACAGAGTGGTGTTGGTAGCAGCATGCCCTATGTTACAGTCCATGGATAATGCATCAGTAGGATCACATCTTGAAGTTCGCCTAGCAGCTGATATCAAACAGGAAGCTGTCAACTCGTTCTTACAGTATCTGTATGAAGGCTTTATGATGCTAACTGAAGAAAATTGTAAAGATGTTGAGAAAGTAGCAAGACTTTTACAAGTGGACAGTGTCACCAAGTGTTGTATTGACTTTTATAATTGTTTACAAAAGAAAACAGGTGTGCCTGTATATCATAACACTCAATATAAATACTCGTCTGCAGATCTGTTAGAATTCCGTCACGTCAGAACGACAGACCTCCAGAAGACAATACAAGAAAGAATGATGAAACGTGCAGCTGCTGATTCAGGGAGACCAATGAGCCCAGGTGGCAAGAGACAAAGGACTCAACAACAACAGCAACAACAAAGACCATTGAGTCCAAATATAGATCTGGCCATGTTTGGACAGAAAGCTGATGACACTCTTAGTATGGCTCACAGTTATATGGGAAATGTTGGTAATCAGGCTGCTGATCCGTGGGAAAGGGTGCCAAGAATTGGTACAGGTCATGGTCAAAGACCACAGCAGAAACCAGGAGTAATCGAAATTGTTGAAGACAGCTTGGAAATTCTACAAACCCAGCCACCAGACAAAGATGGCAATAAATCAGCTCCGCCCGTCATTCAGAAAAGCTTAGCTATTTCTGTTTCTAGTCAAGTTAATTCATCTACAGATGTTCATATTGTTAATGTAAATGATTCATCATCTCATTCCACAATAGTCACTGATGGTCCTATCATGAGTACGGGTAGAGATTCCATTACAGTTAGTCCATTAACCGTCGTGCCAGGCTCATCCGTATCATTATCATCGACATCATCATCATTAACCAAAGATCCACATAAACTCTCGTACGACAACCAGAAAGAAGTGTCTGACAGAAGTCAATTCGCCAAAAAATCTCAGCCATTAGAACAGCAGTCTAGTACACCACAACGAGGTCTGTTCCCTGTCTCAATGTCTCCAGCAGCCAGCATGTCACCTATAAGTCAGATTAGCCAGACCAAGAAATCATTTGCTGCAGGAAGTGCTTCCCAAATTTCCAGCATGTCACAATCCCAGGATTCACCTTCAATGACCAAGCGATCAACAGGAAACGATATGCTGGATAGACCACCCTCCTCAGATTCTGGCAAAGACATGGGGGCAAAAAGTAAAATTGATGATAGTTCTGCATCAAACAGCACTGATATGGCACCTGATTTAAGTATTGTTAAAGTAGAACCCTCGATTGATGACCCTGGCTTAGATATGTATGTTGATGTACCAGATGATGCCATGTTACAAGCACAACATAGGGAACACGATGATGAAAGTGATTTAGAATTGGAGGAAGCTTCGGGAGACTGGTCACGCGATGAAATGTCAAATGAAGCTGGTGGTAGTGATCAGAATAATTCCTGGTATATCGGACAATTTAAAGATGACATGTCAACCATGCAAAGTACAGGCAATACTGGGCAGATTCCAAATTATTTACAGAATTTCCAAAATGAATTTAATTATTCCAATGTTGATCGATTTTGTGGACATAAAATTATGAATTATGAGGAAATACGTCGCTCAAACGTAAACGATCCATTTTCTGACGTTCCTATAGCATATTATCTCTCCTTATCACAGTTAATAGAAATTCATAAAGTTAGTTTAGGACCAGGAAACTTTGCCAAAAACATTTCAGAGAAACTTTACCCAGAGTTATTTGGACCAGATCATTTAAGAACTGGTTTCTCGTATTTTGGTGGTGGGCGCCTGGATAAAAAAGAACTTGATCCAATCAGAAAGTTTTATTTAAAACAATATGTGCTATTTTTTCATCCAGAACTAAATTCAGATCATCTGTGGAAGGAAACTGCTATTTCTAAAATCAATGAAAATTTACGTCGTCCTGTTGACAAGAAGCATGAAATGACCGCTTACAAAACTGCCAACTATTCTGGAGAATTTGAAAATATGTTTATAGTGGAGAATAATGAAAGACCCAGTGATATTGACAGTAGTTGGAATATGAAATTTAGTGCTTTTGACCCTTTTGCCAATATTCCAAATCAAAGTTATCTCCCTTTAAAACAATTGAAGGAAATTCATAGAAAGAGTCTTGGACCTGGGAACTTTGCAAAGCGAGTTTGTGTTAAACTTTTTCCAGAACTTTTTACACCTGAGAAATTACATTTAAATTATTCTTATTTTGGAGGTAGCCATGGCAACTACCCCAGTCACAACAAAAATGATCCACCCAGGTACAAGATGGTGATGTCAGATGATGATATGAAGAAGGGAGATAACTCTGGAGATATATGTTATTTCCTTGACGATGCGATTCCTACCAAAGTTTTAACATTCGGTGAACGTCCTGCTTGTGTTGAACCTGAGGAAGAGAAATATGTACAGGAACTATTAACTTCTGCAGTTTCTAGACAAAATTTTGCATGGAAACTTGTGCGACATTTTTTCATGGATTCTGAATTGAAAGATCACAATTGTTTTGGTCGTAGGGGAAAAAGTCCACTTAATATTGAAAAACTAGAAAAAGTGGAAAATATTGTGTTTGCTTATTATCCTGTCGTTGATGTAGCTTTGTATGCACAAGCTTGGAGAGAATGTATAGTGGCTATTGATAAAGGAATAAGAAACTCTTTTTCTGATTATGGTTATATAAAGGCTGGAGAAAGGAGTTCTCTAACACCCAACAAGCCAGCTTTCAAAACAAAGCCTATGCCTGCATGTATCAAAGCTAAGAAATACCCAGGTTGGAAGGAAGAGCCCTCCGATGACCCCAATGATCAAGAAATAGAATTCATGCCAGGACACAAGTTGGTTCACATAACAGGTCACAAGCGAGCATGTGCGTACTGTAATATTCTCAGACTTAAGACAAAGTCAGGATGGGCCATCAAATCTTATTATAAATGTGAGGCTTGCGATGTTTGCCTCTGCAAGGGAAAAAAAGATTGCTTCATTCGATACCACGAACTAAGGATGGAACAACCAGACTTGTCACCAAAAATGTTACTGAAAACTCTGAAAGAGGCAACGGCTAATCAGACTCCAAAAAAGCCCAGAAAAAGTACTGGAGCTAAGGCTGAAGACCAATATACTATGGCAGGGCAACCAGGGTACGTTAATATAGCACCAAAGTATGAAGCTTTTACGTCGATGATGGCACAGTCAATTGCCGATCAGCTTAAAGCCTATGGTGGCACTTTAGATCCTGATGATGAAGCAACTGAATCTACAAAGCAATCATATATTACTGTCTCACCTAAGACCCCAAATGCAAATGGTCACGATAATACTGAAAATGGGGAATCGGAGCATAAAACTCCCTCATCAGAAAAGGGGAGATTAGCAGCTCAAAATTATGAAACGATGGATTCTGGATCGCAATCTAGTGAACAAGCATCTTCAGTCCAACTTAAAACAACAAACGAACAAAAAAATAGCCAAGAACTGGATGATGAACAACTTTTTTCTCAAGCTATTGATAACCAACAAGAATATTTGTTGTAA

Transcript

Bpl_scaf_44428-3.48

AGAGTAACAAAGCAACTGAAACTGTTGGAATTAAAAATTACTACACCAATACTTCAACTCGTCAACTTAAACTTTCTAATGAAGTATTTCTTTTTCAGAATTATTCAAGATGAACTATTACCAGAAAGTTTACATGAACCAGATACATTCTAGCTCTCTGTTAGGACAGTTAGCTCAGATGTGGCGTAGTCAGATGTTATGTGATGCTCTAATCAGGACGGGGAATGTCACCACAAAGGCACACAGAGTGGTGTTGGTAGCAGCATGCCCTATGTTACAGTCCATGGATAATGCATCAGTAGGATCACATCTTGAAGTTCGCCTAGCAGCTGATATCAAACAGGAAGCTGTCAACTCGTTCTTACAGTATCTGTATGAAGGCTTTATGATGCTAACTGAAGAAAATTGTAAAGATGTTGAGAAAGTAGCAAGACTTTTACAAGTGGACAGTGTCACCAAGTGTTGTATTGACTTTTATAATTGTTTACAAAAGAAAACAGGTGTGCCTGTATATCATAACACTCAATATAAATACTCGTCTGCAGATCTGTTAGAATTCCGTCACGTCAGAACGACAGACCTCCAGAAGACAATACAAGAAAGAATGATGAAACGTGCAGCTGCTGATTCAGGGAGACCAATGAGCCCAGGTGGCAAGAGACAAAGGACTCAACAACAACAGCAACAACAAAGACCATTGAGTCCAAATATAGATCTGGCCATGTTTGGACAGAAAGCTGATGACACTCTTAGTATGGCTCACAGTTATATGGGAAATGTTGGTAATCAGGCTGCTGATCCGTGGGAAAGGGTGCCAAGAATTGGTACAGGTCATGGTCAAAGACCACAGCAGAAACCAGGAGTAATCGAAATTGTTGAAGACAGCTTGGAAATTCTACAAACCCAGCCACCAGACAAAGATGGCAATAAATCAGCTCCGCCCGTCATTCAGAAAAGCTTAGCTATTTCTGTTTCTAGTCAAGTTAATTCATCTACAGATGTTCATATTGTTAATGTAAATGATTCATCATCTCATTCCACAATAGTCACTGATGGTCCTATCATGAGTACGGGTAGAGATTCCATTACAGTTAGTCCATTAACCGTCGTGCCAGGCTCATCCGTATCATTATCATCGACATCATCATCATTAACCAAAGATCCACATAAACTCTCGTACGACAACCAGAAAGAAGTGTCTGACAGAAGTCAATTCGCCAAAAAATCTCAGCCATTAGAACAGCAGTCTAGTACACCACAACGAGGTCTGTTCCCTGTCTCAATGTCTCCAGCAGCCAGCATGTCACCTATAAGTCAGATTAGCCAGACCAAGAAATCATTTGCTGCAGGAAGTGCTTCCCAAATTTCCAGCATGTCACAATCCCAGGATTCACCTTCAATGACCAAGCGATCAACAGGAAACGATATGCTGGATAGACCACCCTCCTCAGATTCTGGCAAAGACATGGGGGCAAAAAGTAAAATTGATGATAGTTCTGCATCAAACAGCACTGATATGGCACCTGATTTAAGTATTGTTAAAGTAGAACCCTCGATTGATGACCCTGGCTTAGATATGTATGTTGATGTACCAGATGATGCCATGTTACAAGCACAACATAGGGAACACGATGATGAAAGTGATTTAGAATTGGAGGAAGCTTCGGGAGACTGGTCACGCGATGAAATGTCAAATGAAGCTGGTGGTAGTGATCAGAATAATTCCTGGTATATCGGACAATTTAAAGATGACATGTCAACCATGCAAAGTACAGGCAATACTGGGCAGATTCCAAATTATTTACAGAATTTCCAAAATGAATTTAATTATTCCAATGTTGATCGATTTTGTGGACATAAAATTATGAATTATGAGGAAATACGTCGCTCAAACGTAAACGATCCATTTTCTGACGTTCCTATAGCATATTATCTCTCCTTATCACAGTTAATAGAAATTCATAAAGTTAGTTTAGGACCAGGAAACTTTGCCAAAAACATTTCAGAGAAACTTTACCCAGAGTTATTTGGACCAGATCATTTAAGAACTGGTTTCTCGTATTTTGGTGGTGGGCGCCTGGATAAAAAAGAACTTGATCCAATCAGAAAGTTTTATTTAAAACAATATGTGCTATTTTTTCATCCAGAACTAAATTCAGATCATCTGTGGAAGGAAACTGCTATTTCTAAAATCAATGAAAATTTACGTCGTCCTGTTGACAAGAAGCATGAAATGACCGCTTACAAAACTGCCAACTATTCTGGAGAATTTGAAAATATGTTTATAGTGGAGAATAATGAAAGACCCAGTGATATTGACAGTAGTTGGAATATGAAATTTAGTGCTTTTGACCCTTTTGCCAATATTCCAAATCAAAGTTATCTCCCTTTAAAACAATTGAAGGAAATTCATAGAAAGAGTCTTGGACCTGGGAACTTTGCAAAGCGAGTTTGTGTTAAACTTTTTCCAGAACTTTTTACACCTGAGAAATTACATTTAAATTATTCTTATTTTGGAGGTAGCCATGGCAACTACCCCAGTCACAACAAAAATGATCCACCCAGGTACAAGATGGTGATGTCAGATGATGATATGAAGAAGGGAGATAACTCTGGAGATATATGTTATTTCCTTGACGATGCGATTCCTACCAAAGTTTTAACATTCGGTGAACGTCCTGCTTGTGTTGAACCTGAGGAAGAGAAATATGTACAGGAACTATTAACTTCTGCAGTTTCTAGACAAAATTTTGCATGGAAACTTGTGCGACATTTTTTCATGGATTCTGAATTGAAAGATCACAATTGTTTTGGTCGTAGGGGAAAAAGTCCACTTAATATTGAAAAACTAGAAAAAGTGGAAAATATTGTGTTTGCTTATTATCCTGTCGTTGATGTAGCTTTGTATGCACAAGCTTGGAGAGAATGTATAGTGGCTATTGATAAAGGAATAAGAAACTCTTTTTCTGATTATGGTTATATAAAGGCTGGAGAAAGGAGTTCTCTAACACCCAACAAGCCAGCTTTCAAAACAAAGCCTATGCCTGCATGTATCAAAGCTAAGAAATACCCAGGTTGGAAGGAAGAGCCCTCCGATGACCCCAATGATCAAGAAATAGAATTCATGCCAGGACACAAGTTGGTTCACATAACAGGTCACAAGCGAGCATGTGCGTACTGTAATATTCTCAGACTTAAGACAAAGTCAGGATGGGCCATCAAATCTTATTATAAATGTGAGGCTTGCGATGTTTGCCTCTGCAAGGGAAAAAAAGATTGCTTCATTCGATACCACGAACTAAGGATGGAACAACCAGACTTGTCACCAAAAATGTTACTGAAAACTCTGAAAGAGGCAACGGCTAATCAGACTCCAAAAAAGCCCAGAAAAAGTACTGGAGCTAAGGCTGAAGACCAATATACTATGGCAGGGCAACCAGGGTACGTTAATATAGCACCAAAGTATGAAGCTTTTACGTCGATGATGGCACAGTCAATTGCCGATCAGCTTAAAGCCTATGGTGGCACTTTAGATCCTGATGATGAAGCAACTGAATCTACAAAGCAATCATATATTACTGTCTCACCTAAGACCCCAAATGCAAATGGTCACGATAATACTGAAAATGGGGAATCGGAGCATAAAACTCCCTCATCAGAAAAGGGGAGATTAGCAGCTCAAAATTATGAAACGATGGATTCTGGATCGCAATCTAGTGAACAAGCATCTTCAGTCCAACTTAAAACAACAAACGAACAAAAAAATAGCCAAGAACTGGATGATGAACAACTTTTTTCTCAAGCTATTGATAACCAACAAGAATATTTGTTGTAAAATGAACAAAATTAAATGATGACTTTTTACATCATTTCTTTGCATAATGTATATTATTCAATTTAGTGCCAAGTACTAGGAGTAAATATCGAGGTGGGAACAAAATCTTATCTTTTGTATCATGCTCTATCTTTACTTTTAAATTTTACAGAAAATGAAGTGATAATATTTAGGTAATCTGTAAAACATGTTGGTGTGCAGTTGTCCATCCAACAAACCAACCACTTAAATGAATTAAAGATTGAAATTTGAAAGTGAATATCATAATCTAGGCTGTGAATTGTGCAATTTGAAATTGAAAATATTTTGTAACCACCTTGAACCTTCTTAGAATGTTATTTGAAATTTGTTTCATGACAATATTTGAGTTTTAGAATAAAATAGTACAATCTAACATGTATGTACTTTGCAAATTTTACATATACCTTTTAAAATTTGTTCATCTTTAATATTTATTTTTGGGGATTCTTTACATACTCCAAATATTAAACGTTAACTTTGTAATTTTAATGCAGTTATTTTTTCTTTAACTAGATTTACCTCTGTTTTTGGTGCGTGCATTTTATTTGTGGTCTCCAAAATAAATTTAGGAAATCTTGAATTAAAACGTATCCAATCTTTATATTTTTAATGAGGGCTGTTCCATTTAAACATATGAGGTACCCGGGGAAGGCACTTTTGAAATGGGGGAACCCCCCATAGAAGCAATTTAAAGCTAGGGTGTGTTCTTTTGATGTATGTGTAAAGCTAACATACAACCACCCATAGCAGCGATTTAAAAGTGCCTTCCCCCGGTACCTCATATGTTTAAATGGAAAAGCCCTGAAACTTAATATTAAAATCGAATAGACTATTTGAATTATGAATTTTTCTTCTGATCTTTTGACGATCGTTCTGAAAGTTAAATTTGGGTTGGAATTTAAAATCAACTGCAAAATGCTAGAATTGAATTTATATTTGAGCTCTTAGACTTGCACTACCAACGAGGGAAGTAACTCTCCCATTTAAAAAGATAAATCTACATTTTGAAAGTTGATTTAATTTTTTTAGATTAAGAAAACCAAATAGATTTTACTTAAAGTAATTCGATTTTTTGAAACTGTAATTTGAACAAATATGAAGATAGGATAGCAACCGATTACTTATAAAATCGTGAATCTCTGAAAATGCTTGAAAAGTTCAATTTGT

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	ZBTB
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00651	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR018379	Domain	BEN domain	Interproscan
IPR033583	Family	BEN domain-containing protein 3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR28665	BEN DOMAIN-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000122	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0000182	Molecular Function	rDNA binding	Interproscan
GO:0000183	Biological Process	rDNA heterochromatin formation	Interproscan
GO:0000792	Cellular Component	heterochromatin	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_44428-3.48 global RNA-seq network