Gene detail

Detailed information of Bpl_scaf_45183-4.13 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_45183-4.13	FATTY ACID SYNTHASE	Bpl_scaf_45183	390546	410451	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_45183-4.13

ATGCCAGCATGTGTGGGAGAGGGGTTTTCTCCTTTATCTGGGGAGAGACCCGATGGTTCAATGGACTATATTGTTATAAGTGGTATTTCCTGTCGTTTACCAGAATCTGAAAACATGGAGGAATTCAAGAAACATTTGATGAAAGGGGATAATATGGTAACAGAAAACAGAAGATGGGAACCAGGGTCACATGGGTTGCCAGCAAAATCTGGTACCCTGATGGATATAAGTAAATTTGATGCAGCATTCTTTGGTGTCCCTCCAAAGTTAGTTGATAATATGGATCCTCAGTTACGTATTATGTTAGAATTGACACATGAAGCACTTATAGACTCTGGTATTTCTCCTATGACAATAAGAGGAACAAACACAGCAGTGTATGTAGGATGTGGACTGTCAGAGACATGGGAGGCTTTGTCAACAGATGATAGTAACGTAACAGGATATTCTCCACTTGGTTGTACCACTAGTATGTTTGCCAACAGAATCTCGTTCGCTTTTGATCTTAAAGGACCTAGTTGTGGGTTAAGGAATGGATGTGCGTCTGGTCTGTTGGCATTAGACAGAGCTGTAGCCAGTATAAGAAATGGTGACTGTGATACAGCGATAGTTGCTGGATGTAATCTTTGTCTAAAGCCTGCTGCATCTGTCCAACTGGCAGAGATGAATTTGTTATCATCTGATGGTCAATGTAGATGTTTTGATGAAAGTGTTGATGGTTATGGTAGAAGTGAGGGGGTTGTTGTGATGTGTCTTCAGAGAAAAACAAATGCAAAGAGGATTTATTGTACAGTGATACACTCCAAATCTTCAACATTTATCACTGATAACGATCATATGAACTATCCTAATTTTGAAGAAGAGAGAAAGTTTTTACAAGATACATACAAAGAAGCTAGGCTGGATCCCTCACATGTGACATATATAGAGGCTAACAGTAGCTGTTCAAAGATTGCAGATGCATCAGAAATAAATGCTATCGCTGATGTACTTTGTAGAAACAAGACTAAGCCTCTATTGATAGGCTCAGTCAAGTCTAATATCGGTCATACAGAAGCAACGTCTGGGCTTGCCTCAGTATCAAAAATCGTTATCGCCATGGAAGATGGTGTGATTCCTCCAAATATTAATTATAAATTACCCAACATTCAGAATGGACAAATCAAGGTTGTTGAAGAAAGAACAAGGTTAAATGGTGACTATTGTAGTGTGAACTCTTTTGGACTTGGAGGTGCAAATGTTCATACTATATTTAAGTCATTTACTGATAAAAACAACAAATATCATTTTGCAAATGAAAAGAAGAGATTGTTTATTTACTCTGCAAGGACAAAACCAGCTTTAGAGTCAATATTTAATCTTGTGAAGTCACATCCTAGAGATTCATATCTTCATTTTCTTTTAAATGAAACAAGTGGACCATGGAATAAACAATTGCCTTATAGGGGTTATGCTGTACTCAACAGTCAAAATCAAGTAGAAGAAATTCAGAAAAGTGAGATGGAGACCCAACACCCTCTATGGTTTATATTTTCTGGTATGGGTACACAATGGCCTAAGATGGGCAGACAGATGATGCAGATTGATATGTTTAGGACATCTATAATGAAGTGTGACCGAGCACTCAGACCACATGGTATTAGTTTATATGACATGATAATGGAGGGAGACAGCAAAACGTTTGATTCTGTTACAAATTCATTTGTGACCATTGCTGCCATTCAGGTAGCATTGGTAGATTTATTATTCAGTATGAATATTAAGCAAGATGGCATTATTGGCCATTCTGTTGGTGAACTTGGATGTGGTTATGCTGATGGCTGTCAGACTGCAGAAGAAACTGTCCTGGCAGCATATTGGAGAGGTTACTGTATAGCAGAGGCCGATTTACCTCCTGGAGGAATGGCAGCTGTAGGTATGACTTGGGAAGAGGCCAAGCAGAAGTGCCCAGAAGGAGTAGTGGCAGCTTGTCATAATGCTAAAGGAACAGTAACAATATCAGGACCTGTGGAGAAAGTATCTAAATTTGTACAGGAACTCAAAGAGAAACAAATATTTGCTAAAGAAGTTAACAGTGCTGGTGTTGCATTCCATTCTGGTCTCATGCAAAAAGTAGCTCCAAGACTTCGAGAAGAAATGTCCAAAATATTAAAGCCCAAATTGAGGACAAGTAAGTGGATTAGTTCATCCATTCCTGAATCACAATGGGACACAGACCTCGCCAAGACAGCATCAGCAGATTACCTTGTAAACAATTTGGTTAGTCCAGTGCTTTTCCAGGAAGCTATAAAACATATTCCATCAAACGCTATAGTGATAGAGATTGCACCACACGGTCTCCTGCAAGCTGTGCTGAAGAGGTCTTTAGATTCCAGTTGCACTATGGCAAGTTTGATGAAAAGAGACCATTCCTGTAATCCAGACTTTTTCTTCACAAACTTAGGAAAATGTTACATTCAAGGACTAGATTTCAATCCATTGGGAATGTTCCCACCAATTCAGCACCCTGTTCCAAAGGGTACACCCATGATAGCTCCAGCCATAAAGTGGGACCATTCGAAGACTTGGTATGTTCCTGAAGTGGACCAATTCCTTAGTGGAAGCTCTGGAAGACGAGCAGAGAGTAGATTCGAGTTTGATGCCAAGAAGAGTGTGAAAGACAAATTTTTAGTTGGCCATAAGATTGATGGACGTGTGTTGTTTCCAGCAGCAGGTTACATTATTCTGGCATGGAATGCACTGGCCAAGTTTTACGGGAAGATGTTTGATCGAATGCCAGTTATATTAGAAAATATTAATATTCACAGAGCTACATTGATACCCTCCAAAGGTAGTTTGAAATTTGAGGTCAGTTTGATACCAGTATTGAGAGAGTTTGAGATATTGGAAGGAGATGGACTGGTAGCCAGTGGTAATATCTACTTGCCTTCTGAGCCAATAAGGGGATACAACAGGGATGGAGTTTTACCTCCAGCAAGTCCTCGCCAAAGGAACGAGTTGGAATTAAGACCAGCTGATATTTATAAAGAATTAAGACTGAGAGGATATGAATACGAGGGAGAATTTAGAGGCATCTTCAAAGCTGGGAATAGAGGTGATAATGGTGAACTCCTGTGGACAAATAATTGGACAACGTTCCTGGACACAATGATGCAGATGAATTTATTAACAAGACCAGGATCAGACCTTTTTCTACCTACTGGTATCAAATCTCTGAAAATAGATCCTGAATCCCATAAGTCATCCCTCATTTTGGCTGACCAATCAGTTGTTCCTGTGTTTATTGATCAGTACTCCGATACGACGTCAGCTGGTGGTATTGAGATGCATGGCCTTCAGCTGACTTCAGCCCCCCGTAAACAGAACCAACAGCCTGTCACACTGGAAGAAAGTCTCTTCATACCTAATATGGAAATAGGGGGAAAAGAACTGTCCCCTGAAGATTTAAAACAATATTGTTCAAAATGTTCTTCAGTAGCAGCAAATGGCATCCTTAGATTGATGGGTATGGAAGGTCTAGATTTTCCTAACTTTAACATGTTAAAGCAAGTGTCCAAGACTTTGAAGCCTGTCAGATTTGTAGATGATGTTGAAAAGTATTTGAAGATGTCACAAAATGGTTTGTTTGTAGTACTGCACAAGCTGTTTGGTATGTCTATTGATAATTTTGTACAGAACATTAGAAATATCTTGGATGCTTACAAGTCAGAATTGATTCACGACAGATTGTTGTCGAATCTTTTAAGGCCAAGACCACTCAAACCATGTCTTGACCTTGTCCTTGAAAACAATACAACAAATACTATGAAAGTGTTGGAACTTGGTTCCTCGACTGGTAGTTTGACTGATTTAGTGCTACAGCACCTAAACAGTCAACCAATGGCTTATGTTGATTATGTACAAGTATTGTCTGAGGACTCAAATAACCAGCCAGATCTAGTTCCAGCTGGTGTAAAGCAGACGACGTGGGACCTGGAACAAAATCCTCCAGAAAATCTGAATGGGATGAGACTTGTTATTGCCCACAATTTCTTACATAGACAAAGTAGTGTTGCTACATGTTTGAGAAATATTAGCAAAGTGTTGGATGATGATGGCTTTCTACTTGTTCACGAGATCACCCATAATGTACATCTTCATTTAGCTGTCATGGGACTCCTGTCAGAACTTCCTGTTGTGGCAGAAACCAGATCTGTTGCTTGTTATTGTAATGAAGAAAAATGGAGGGACATATTTGAAAAGGAACATTTTCAGGTTGTATCACAGAAGTCAGATGGTCTATTAAGCACACTGTTTTTACTTCGTAAGGTGACACAGAATGACGTTAAATCTCAAACTGTTCTGAATCTTAGTAATGATATCACAAAGTCTGTTGATGATTTGAAGAAAAAGTTACAGGAAGTCACAGAAAAACCCAAAGGGGAGAATTTATGGTTGTTGGCTAAAGACTGTAGTAGTGGTGTTGTTGGACTAGTCAACTGTTTAAGAAAAGAATTTGGAGGAGAAAAAATCAGGTACATTATCTTGGTTATGATTGAGTCTTGTTAA

Transcript

Bpl_scaf_45183-4.13

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00109	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF00698	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan
PF02801	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF21089	PKS_DH_N	Polyketide synthase dehydratase domain	Domain	Interproscan
PF21149	FAS_pseudo-KR	Fatty acid synthase, pseudo-KR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001227	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR014030	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR014031	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR014043	Domain	Acyl transferase	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR016036	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR020841	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR042104	Homologous_superfamily	Polyketide synthase, dehydratase domain superfamily	Interproscan
IPR049391	Domain	Fatty acid synthase, pseudo-KR domain	Interproscan
IPR049552	Domain	Polyketide synthase, dehydratase domain, N-terminal	Interproscan
IPR049900	Domain	Polyketide/metazoan fatty acid synthase, dehydratase domain	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_45183-4.13 global RNA-seq network