Gene detail

Detailed information of Bpl_scaf_45643-4.20 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_45643-4.20	STAR-RELATED LIPID TRANSFER PROTEIN 9	Bpl_scaf_45643	320085	388866	-

Gene Structure

More details in Jbrowse Sequence

CDS

Bpl_scaf_45643-4.20

ATGTTACAGCCAGCGGACAAGAACTTTGCTGGTCAGAAGAAAGTGTACAGTGACATAGGTTTGGAGATGTTAGACCATGCATTTGAAGGTTACAATGTCTGTATATTTGCCTACGGTCAGACTGGATCAGGAAAAAGTTACACGATGATGGGAAAGAATGAACCAGGTGGAAGGTGTCTGAAATTGTCTTTTCTCTCCATTTTTAGAAAGAGAAGTGATATTGTTGTTTGGAAAAGTGAGGTCAGTTACATGGAAATATATTGTGAAAGAGTCAGAGATTTATTGAACCCTAGTAACAAAAACAATCTGAAAGTACGAGAACACCCTTTATTGGGCCCCTATGTAGAAGATTTGTCCAAAACGGTAGCTGCCACTAACATGAACGAGACCAGCAGTAGATCTCATGCTGTATTTACTATAATATTCACACAGAAAAGATATGACCAGACAACAGATCTTACTGGTGAAAAGGTCAGCAAGATCAGTTTGGTTGATCTGGCAGGAAGTGAGCGAGCAGACTCGACGGGTGCTACTGGAACAAGATTAAAAGAGGGAGCTAACATTAACAAGTCTCTAACAACACTTGGAAAAGTCATCTCGGCTCTCGCTGAAGTGGCTAATAAAAGAAAGAAGAAAGAAAATTTCATACCTTACAGAGATTCTGTCCTAACATGGCTACTGAGAGAAAACCTTGGTGGAAATTCCAAAACAGCCATGATAGCAGCTTTGAGTCCTGCAGACATTAATTATGATGAAACACTCGGTACTCTGAGATATGCTGACAGAGCCAAACAGATAGTGTGTAAGGCAGTTGTTAATGAAGATCCTAATGCTAGGCTAATCAGAGAACTGAAAGAAGAGGTGGCTAAACTTAGGGAGATCCTACAACATGAAGGCATTGAGATTGAGGAAGGAACTTTAGCCAAAAAAGAAGGAACCAGATCAAGGAAGCAGTCTGTAGCATTAGACGAGAAAGAAGACGCTTATGAAAGACTACAAATGTCTGAGAAACTAATCGCAGAATTAAATGAATCATGGGAAGAAAAGCTACGAAAAACAGATCAAATTAGGAAGGAAAGGGAGAAAGTATTAGAAGAAATGGGTGTGGCATTAAAAGAAGATGGAGCTACTATAGGAGTATTCTCCCCTAAAAAGACGCCACATTTAGTTAACTTAAATGAAGATCCGTTGATGTCAGAATGTCTGCTGTACTATATAAAACAAGGGACAACTCGTGTAGGGGGAGGATGCCACCAGGATATACAGTTAACAGGAACAACAATATTAGACTTACATTGTTATTTTGAATGTAAAGATGGCAATGTTACTGTGATACCATGTGAAGGAGCTCTATGTTACATCAATGGCCGACAGATTACTGAACCAATGGAGATGAAGACTGGTGCACGTGTTATACTGGGAAAGCATCACGTCTTCAGATTTAACAATCCAGAACAAGCACGACAGAGCAGAGCTCACTTGATTGATTTTGATCAGATTGAATCGCAGGGGTCTGAACCAGTAGATTGGACATTTGCACAGTTAGAATTATTGGAGAAACAAGGGGTAGATTTGAGAGAAGACATGGAACAAAGGCTATGTGCATTAGAAGAACAATACAAGAAAGAAAAAGAAGAAGCAGATTTATTGTTTGAACAACAGAGAAAGGATTATGAGACACGGATACAGAATCTACAAGAACAAGTAGAAAACTACTCTATGATGTCATCTGTGTGTCATATGGAGGATGTCATAACAGAAGAGGAACAAGATTACACTTGGACAGAGAAGGAGAGACAGCTAGCAGCATGGGCCTTTAGAAAGTGGAAGTACCACCAGTTTACTTCACTCAGGGATGACTTGTGGGGAAATGCTATCTTCTTAAAGGAAGCTAATGCCATTAGTGTTGAGCTCAGTAAAAAGGTGCAGTTTCAATTTGTATTGTTGACAGACACACTCTACTCTCCTCTCCCACCAGATATACTGTCTTCAGAAAAGAGAGACTTCTCTAGACCCTTCCCAAAGACTGTTGTTGCTGTTGAGGTCCAAGATACTAAAAATGGGGCTACACATTACTGGGCCCTAGACAAATTAAAACAACGGCTTGAACTAATGAGAGAGATGTACCACAATGAGGCTGAGTTATCGCCCACGTCACCTGAGCCAAACTTAGAAAGTATGACGGGAGGAGATCCGTTCTATGATAGATTTCCTTGGTTTAGACTTGTTGGCAGGGCATTTGTTTACCTAAGTAATCTGTATTATCCAGTACCATTGATTCACAGAGTAAACATTGTCAGTGAGAAAGGAGAGGTCAAGGGGTCAATACGGGTAGCTGTTCAGGCCATTACAGGTAAAGAAGAAACTCCAGACTATACTCCAGGTATCAAACAGTCAGGAAATGCCAAGATATCATTTAAAGATGATGATTATTTTAAAAAGAAACAGATGTATGATAAAACTACAGAGCAAGCACCTTCTGCTGAGGAATTACGTTATGTAGAGGGTGAAGGTCAAAGTCCAGACAATGCTCCTAGTGATGATATGAATTACGGTATCATAGAGAAGCAAGCAATCACAGACATCTTCCCTGAGATCAATGAAAATGAACTTCCTGGACACTTAAAACTCGGCTCACAACTGTTATTTAGAGTCACTATACTAGAGGCTTCTGGGATATCTCCAGAGTATGCTGATATATTCTGCCAATTCAATTTTCTTCATCGCCATGACGAAGCTTTCTCTACAGAACCCTTGAAGAATTGTGGCAAAAATAATCCACTGGGATTTTATCATGTTCAAAATTTCACAGTAACTGTTACTAAATCGTTTGTAGACTATATAAAGAGTCAACCAATCGTGTTTGAAGTATTTGGACATTATCAACTTCATCCACTACATGAACAAGCCAAAGATTTCGGTCAGAATAATATTAGACCTCCTCCAAGGAGAAGTTTCCCACCAATGATTCCTGTGTCAAAACCAGTTCCATCACCAAAGTTTGGTGTTCTTGTCCCACCCAGAGATAGAAAGAAAAAGAAAAAACAAGATTTATTTATTGATACTGAAAAGGCTTCAGGGAAACGTGCCAGTCACATTCACTCTAGATTTGATTTACTTGTATGGTTTGAGATCTGTGAACTGGCTCCCAATGGAGAATATGTGCCGGTAGTAGTAGACCACAGTGAAGAGTTCCCATGTACAGGGACTTACTTATTACACCAGGGACTACAACGTCGTTTAGCAATCACCATTATGCAGGAACAGAGTCCAGAGACAGACTTATTGTGGAAAGATGTTAAGGAATTAGTTGTAGGACGTATTAGGACCACACCAGAGTACACAGATTTTGATCTGGAGACCAATGTTTTATCTCTCAGTTTGTTCCCGGCATCTTATATACAGTATCCAGGAGATGACAGAATCTACTTCAGATTTGAAGCAGCTTGGGATAGCTCTCTACATAATTCTAGTCTACTGAACAGGGTAACATCTACTGGAGAGAGAGTTTACATGACATTATCTGCATATATTGAGGTTGAAAATTGTGATCAGCCAGCTTGTATAACAAAGGATCTATCAATGATAATCTACTCCAGGGATACTAAAATCTCAACATCAAGTTCTCCTTTCAGGTCTTTAAGAAGTTTATTTGGTGCGTCTAAATCTCAAGATGCCAACAGAGTCAGTGGAATCTACGAACTTTATTTACGGAAGGCGTCTGAAACAGGTAGTCCAGGTGCTCAGCGTCGCCAGAGAAAAGTTCTGGACACCTCCTCAACTTATGTAAGAGGAGAAGAGAATCTGAATGGATGGAGGCCTCGTGGTGATTCACTTATATTTGATCATCAGTGGGAATTAGAAAAACTGACTCGATTAGAAATGGTATACGGACATTTATCATAA

Transcript

Bpl_scaf_45643-4.20

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF00498	FHA	FHA domain	Family	Interproscan
PF12423	KIF1B	Kinesin protein 1B	Family	Interproscan
PF12473	DUF3694	Kinesin protein	Family	Interproscan
PF16183	Kinesin_assoc	Kinesin-associated	Family	Interproscan
PF16796	Microtub_bd	Microtubule binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR022140	Domain	Kinesin-like KIF1-type	Interproscan
IPR022164	Domain	Kinesin-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031852	Domain	Spindle pole body-associated protein Vik1/Cik1, microtubule binding domain	Interproscan
IPR032405	Domain	Kinesin-associated	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47117	STAR-RELATED LIPID TRANSFER PROTEIN 9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10392	KIF1; kinesin family member 1	-	Motor proteins	ko04814	PMID: 28812709

Expression pattern

1. Expression trend for Bpl_scaf_45643-4.20 global RNA-seq network