Detailed information of Bpl_scaf_50876-9.2 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_50876-9.2PROTEIN VAVBpl_scaf_50876866144945324-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00017SH2SH2 domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF00130C1_1Phorbol esters/diacylglycerol binding domain (C1 domain)DomainInterproscan
PF00169PHPH domainDomainInterproscan
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF07653SH3_2Variant SH3 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000219DomainDbl homology (DH) domainInterproscan
IPR000980DomainSH2 domainInterproscan
IPR001331Conserved_siteGuanine-nucleotide dissociation stimulator, CDC24, conserved siteInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR002219DomainProtein kinase C-like, phorbol ester/diacylglycerol-binding domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR037832DomainVav, PH domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45818PROTEIN VAVInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0043087Biological Processregulation of GTPase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05730VAV; guanine nucleotide exchange factor VAV-cAMP signaling pathway ko04024PMID: 28812709
Focal adhesion ko04510PMID: 28812709
Regulation of actin cytoskeleton ko04810PMID: 28812709
Natural killer cell mediated cytotoxicity ko04650PMID: 28812709
T cell receptor signaling pathway ko04660PMID: 28812709
B cell receptor signaling pathway ko04662PMID: 28812709
Fc epsilon RI signaling pathway ko04664PMID: 28812709
Fc gamma R-mediated phagocytosis ko04666PMID: 28812709
Leukocyte transendothelial migration ko04670PMID: 28812709
Chemokine signaling pathway ko04062PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_50876-9.2 global RNA-seq network
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