| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_54300-1.11 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | Bpl_scaf_54300 | 105040 | 155525 | + |
| CDS | |||||
| Bpl_scaf_54300-1.11 | |||||
| Transcript |
| Bpl_scaf_54300-1.11 |
| Protein |
| Bpl_scaf_54300-1.11 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UFD/UBQ|UBQ_Other |
| Ubiquitin Family | DUB|USP|USP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | Family | Interproscan |
| PF06337 | DUSP | DUSP domain | Domain | Interproscan |
| PF14533 | USP7_C2 | Ubiquitin-specific protease C-terminal | Family | Interproscan |
| PF14836 | Ubiquitin_3 | Ubiquitin-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001394 | Domain | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR006615 | Domain | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | Interproscan |
| IPR018200 | Conserved_site | Ubiquitin specific protease, conserved site | Interproscan |
| IPR028135 | Domain | Ubiquitin-like domain, USP-type | Interproscan |
| IPR028889 | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR029346 | Domain | Ubiquitin carboxyl-terminal hydrolase, C-terminal | Interproscan |
| IPR035927 | Homologous_superfamily | DUSP-like superfamily | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR050185 | Family | Ubiquitin carboxyl-terminal hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21646 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004843 | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0016579 | Biological Process | protein deubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11835 | USP4_11, UBP12; ubiquitin carboxyl-terminal hydrolase 4/11 | EC:3.4.19.12 | Peptidases and inhibitors | ko01002 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_54300-1.11 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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