Detailed information of Bpl_scaf_5959-7.12 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_5959-7.12CARBON CATABOLITE REPRESSOR PROTEIN 4Bpl_scaf_5959770683792997+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF21171PDE12-like_N2',5'-phosphodiesterase 12-like, N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR048821Domain2',5'-phosphodiesterase 12-like, N-terminal domainInterproscan
IPR050410FamilyCCR4/nocturin mRNA turnover and transcriptionInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000288Biological Processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decayInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K19612PDE12; 2',5'-phosphodiesteraseEC:3.1.13.4
EC:3.1.4.-
Messenger RNA biogenesisko03019PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_5959-7.12 global RNA-seq network
TOP