| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_8148-1.16 | TFIIH, POLYPEPTIDE 4 | Bpl_scaf_8148 | 111604 | 118361 | + |
| CDS | |||||
| Bpl_scaf_8148-1.16 | |||||
| Transcript |
| Bpl_scaf_8148-1.16 |
| Protein |
| Bpl_scaf_8148-1.16 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03849 | Tfb2 | Transcription factor Tfb2 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004598 | Family | Transcription factor TFIIH subunit p52/Tfb2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13152 | TFIIH, POLYPEPTIDE 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000439 | Cellular Component | transcription factor TFIIH core complex | Interproscan |
| GO:0001671 | Molecular Function | ATPase activator activity | Interproscan |
| GO:0003690 | Molecular Function | double-stranded DNA binding | Interproscan |
| GO:0005675 | Cellular Component | transcription factor TFIIH holo complex | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0070816 | Biological Process | obsolete phosphorylation of RNA polymerase II C-terminal domain | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03144 | TFIIH4, GTF2H4, TFB2; transcription initiation factor TFIIH subunit 4 | - | Basal transcription factors | ko03022 | PMID: 28812709 |
| Nucleotide excision repair | ko03420 | PMID: 28812709 | |||
| Viral carcinogenesis | ko05203 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_8148-1.16 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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