Detailed information of Bpl_scaf_8332-2.32 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_8332-2.32TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASEBpl_scaf_8332202187216993-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03054tRNA_Me_transtRNA methyl transferase HUP domainDomainInterproscan
PF20258tRNA_Me_trans_CAminomethyltransferase beta-barrel domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004506FamilytRNA-specific 2-thiouridylaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR046885DomaintRNA-specific 2-thiouridylase MnmA-like, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11933TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002143Biological ProcesstRNA wobble position uridine thiolationInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00566mnmA, trmU; tRNA-uridine 2-sulfurtransferaseEC:2.8.1.13
Sulfur relay system ko04122PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_8332-2.32 global RNA-seq network
TOP