| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_920-1.4 | MYC PROTO-ONCOGENE | Bpl_scaf_920 | 146056 | 149295 | + |
| CDS | |||||
| Bpl_scaf_920-1.4 | |||||
| Transcript |
| Bpl_scaf_920-1.4 |
| Protein |
| Bpl_scaf_920-1.4 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | bHLH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00010 | HLH | Helix-loop-helix DNA-binding domain | Domain | Interproscan |
| PF01056 | Myc_N | Myc amino-terminal region | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002418 | Family | Transcription regulator Myc | Interproscan |
| IPR011598 | Domain | Myc-type, basic helix-loop-helix (bHLH) domain | Interproscan |
| IPR012682 | Domain | Transcription regulator Myc, N-terminal | Interproscan |
| IPR036638 | Homologous_superfamily | Helix-loop-helix DNA-binding domain superfamily | Interproscan |
| IPR050433 | Family | Myc family transcription factors | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45851 | MYC PROTO-ONCOGENE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K04377 | MYC; Myc proto-oncogene protein | - | MAPK signaling pathway | ko04010 | PMID: 28812709 |
| ErbB signaling pathway | ko04012 | PMID: 28812709 | |||
| Wnt signaling pathway | ko04310 | PMID: 28812709 | |||
| TGF-beta signaling pathway | ko04350 | PMID: 28812709 | |||
| Hippo signaling pathway | ko04390 | PMID: 28812709 | |||
| Hippo signaling pathway -fly | ko04391 | PMID: 28812709 | |||
| Jak-STAT signaling pathway | ko04630 | PMID: 28812709 | |||
| PI3K-Akt signaling pathway | ko04151 | PMID: 28812709 | |||
| Cell cycle | ko04110 | PMID: 28812709 | |||
| Cellular senescence | ko04218 | PMID: 28812709 | |||
| Signaling pathways regulating pluripotency of stem cells | ko04550 | PMID: 28812709 | |||
| Thyroid hormone signaling pathway | ko04919 | PMID: 28812709 | |||
| Pathways in cancer | ko05200 | PMID: 28812709 | |||
| Central carbon metabolism in cancer | ko05230 | PMID: 28812709 | |||
| Transcriptional misregulation in cancers | ko05202 | PMID: 28812709 | |||
| MicroRNAs in cancer | ko05206 | PMID: 28812709 | |||
| Proteoglycans in cancer | ko05205 | PMID: 28812709 | |||
| Colorectal cancer | ko05210 | PMID: 28812709 | |||
| Thyroid cancer | ko05216 | PMID: 28812709 | |||
| Acute myeloid leukemia | ko05221 | PMID: 28812709 | |||
| Chronic myeloid leukemia | ko05220 | PMID: 28812709 | |||
| Bladder cancer | ko05219 | PMID: 28812709 | |||
| Endometrial cancer | ko05213 | PMID: 28812709 | |||
| Breast cancer | ko05224 | PMID: 28812709 | |||
| Small cell lung cancer | ko05222 | PMID: 28812709 | |||
| HTLV-I infection | ko05166 | PMID: 28812709 | |||
| Hepatitis B | ko05161 | PMID: 28812709 | |||
| Kaposi's sarcoma-associated herpesvirus infection | ko05167 | PMID: 28812709 | |||
| Epstein-Barr virus infection | ko05169 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_920-1.4 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
