Detailed information of CAI8026178.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8026178.1RIBOSOMAL PROTEIN S6 MODIFICATION PROTEINcontig_2870_pilon1913119853+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08443RimKRimK-like ATP-grasp domainDomainInterproscan
PF18030Rimk_NRimK PreATP-grasp domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004666FamilyRibosomal bS6 modification enzyme RimK/Lysine biosynthesis enzyme LysXInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR013651DomainATP-grasp fold, RimK-typeInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR041107DomainRimK, preATP-grasp domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21621RIBOSOMAL PROTEIN S6 MODIFICATION PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0009432Biological ProcessSOS responseInterproscan
GO:0016879Molecular Functionligase activity, forming carbon-nitrogen bondsInterproscan
GO:0018169Molecular Functionribosomal S6-glutamic acid ligase activityInterproscan
GO:0018410Biological ProcessC-terminal protein amino acid modificationInterproscan
GO:0036211Biological Processprotein modification processInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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