Gene detail

Detailed information of CAI8027957.1 in Geodia barretti Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
CAI8027957.1	MRR RESTRICTION SYSTEM PROTEIN	contig_3124_pilon	28411	29406	+

Gene Structure

More details in Jbrowse Sequence

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04471	Mrr_cat	Restriction endonuclease	Family	Interproscan
PF18755	RAMA	Restriction Enzyme Adenine Methylase Associated	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007560	Domain	Restriction endonuclease type IV, Mrr	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR011856	Homologous_superfamily	tRNA endonuclease-like domain superfamily	Interproscan
IPR040843	Domain	Restriction enzyme adenine methylase associated	Interproscan
IPR052906	Family	Type IV Methyl-Directed Restriction Enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30015	MRR RESTRICTION SYSTEM PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004519	Molecular Function	endonuclease activity	Interproscan
GO:0009307	Biological Process	DNA restriction-modification system	Interproscan
GO:0015666	Molecular Function	restriction endodeoxyribonuclease activity	Interproscan
GO:0043590	Cellular Component	bacterial nucleoid	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

TOP

Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering
Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.