| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8027983.1 | HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR | contig_3124_pilon | 68681 | 69277 | - |
| CDS | |||||
| CAI8027983.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8027983.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00440 | TetR_N | Bacterial regulatory proteins, tetR family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001647 | Domain | DNA-binding HTH domain, TetR-type | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR023772 | Conserved_site | DNA-binding HTH domain, TetR-type, conserved site | Interproscan |
| IPR036271 | Homologous_superfamily | Tetracyclin repressor-like, C-terminal domain superfamily | Interproscan |
| IPR050109 | Family | HTH-type transcriptional regulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30055 | HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000976 | Molecular Function | transcription cis-regulatory region binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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