Detailed information of CAI8030673.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8030673.1NITRITE REDUCTASE (NADH) LARGE SUBUNITcontig_361_pilon1644619452-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03460NIR_SIR_ferrNitrite/Sulfite reductase ferredoxin-like half domainRepeatInterproscan
PF04324Fer2_BFDBFD-like [2Fe-2S] binding domainDomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF13806Rieske_2Rieske-like [2Fe-2S] domainDomainInterproscan
PF18267Rubredoxin_CRubredoxin NAD+ reductase C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005117DomainNitrite/Sulfite reductase ferredoxin-like domainInterproscan
IPR007419DomainBFD-like [2Fe-2S]-binding domainInterproscan
IPR012744DomainNitrite reductase [NAD(P)H] large subunit, NirBInterproscan
IPR012748DomainRieske-like [2Fe-2S] domain, NirD-typeInterproscan
IPR016156Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR017941DomainRieske [2Fe-2S] iron-sulphur domainInterproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR036136Homologous_superfamilyNitrite/Sulfite reductase ferredoxin-like domain superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR036922Homologous_superfamilyRieske [2Fe-2S] iron-sulphur domain superfamilyInterproscan
IPR041575DomainNADH-rubredoxin oxidoreductase, C-terminalInterproscan
IPR041854Homologous_superfamilyBFD-like [2Fe-2S]-binding domain superfamilyInterproscan
IPR045854Homologous_superfamilyNitrite and sulphite reductase 4Fe-4S domain-like superfamilyInterproscan
IPR052034FamilyNitrite and Sulfite Reductase 4Fe-4S DomainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43809NITRITE REDUCTASE (NADH) LARGE SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0008942Molecular Functionnitrite reductase [NAD(P)H] activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0042128Biological Processnitrate assimilationInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0051537Molecular Function2 iron, 2 sulfur cluster bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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