Gene detail

Detailed information of Chiridota_g29087 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g29087	5'-NUCLEOTIDASE DOMAIN-CONTAINING	chr_17	3154951	3196826	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g29087

atgcacttctttcatttcaacaacctccaccccaacccgaatctcgtgctcaatggcagtcgcatccctaaagttgaccacactaagttcctgggtttaatcctagaccccaagctctcctacaagcaacatatcaccaacttgaaacagaaatgcaacagctccctcaattttctccacctcctctccaacaccacttggggtgtgaacccccacgttctcctcaaaatcttcaggctcaccatttgtgccaagctcgactactgcaatattgtctactgtgctgctgacaactcttacctcaaccacatcaacactattaaaattaaagccctcagactttgcatggtgtctacaggacttcccccaatcaccagccttcactttgaagccaatgatccaccatttctgctaagactccaaggctgtcctttcttgttccctaaagttgaaaacacaaagttccttggtctaactctagaccccaagctcacctacaagccacacatcaccaacctgaaactaaaatgcaatagctccctcaaccttctccgactgctctccaacactacttggggagcgaaccgctatgctctcctcaaaattttcaggctcaccattcgtgccaagcttgactatggcaatattgtttactgtgtcgctcacaactcatacctcaaccacattaacaccatccaaaatgaagccctaaggctttgtctaggagcctaccggacctccccaatcactagccttcatgttgaagccaacgaacccccctttctacttagatgtaaaaagcttagcctctcctatgcttttagagtcctcaccaacacccagaaccctgtttacaacctcattaggtaccccaatttctcctccctctttgataggactaaaaccctatcgccccccttcagcttacgcattaaatcagacctctttcaacttggcatcaaccccgccactctcggcacctattcctggcccacttttccgccttgggccaccccccttccttctgtccacctagacctctccacttataacaaaactcaaactcaccctaatctcttcatcaatctccacaaccaaatcaaagaccaactctcaaattacacctccatctatactgatggctccaaggaaggcaacaagacagctgctgctgccatcatccaagacatcaccctcagtagcagacttcctgaccactcatccatcttttcagccgaggctaaggccattctcctcgccctcaactttattgagtactctcctcttagtcactttgccattttctctgactcaaaggctgttcttacttcattactcaatcttaaatgggataacctcacctgccacctcctcctccggaaactcttttctcccaccctctgcaggaaaagtgttcttttcttctggatacccagccatgttggcatccctggcaatgacagggctgatacagccgctaagcttgcccttaacctcctcccttccccttttcccaaaaccctctctgacatcaaaccgcttatcgcttctcttgttcgtgaccgctggcaaaccttatggaacttccaaattgataacaaactccatgttatccagcccacaatcccgatcaaatccaccatcaacaacctttctcgtatcgacaacgttcatattacccgtcttagaattgCAACTAAAATGGCAATGAGCATGAATGTAGACTCCAAAGCCATTTTTGCCAACAATGAAGTTGACTTGTCAGAAATTAATGTGTACGGCTTTGACTATGATTATACCCTGGCTTGCTACAGGCAAGAGCTGCATCAATTGATTTACCAACAGGCGGTGGACAATCTGGTTGACAGAAAAAAGTTTCCGCCTGGAATAAAAAAGATGAGGTATAAACCAAACTTTGGAATAAGAGGGCTGCATTTTGATACAAAAAGGGGGCTGTTAATGAAGATAGATGCTTTTCACCATATTCAGTTGGGTACCGTTTACAGAGGCTTGAAGAGGCTAGCAGATACAGAGGTGTTAGAATTGTATGAAGGTACCCATATACCAGAACGTCTTCTCACATCGTTCCCAGGCCAAGAACCTAGCTCTTTCAGGCAGCTGATAGATCTTTTTTCCATACCAGAATTAACTCTTCTTGCCAATGTAATCGAGTATTTGATTCAAAGTCAAATCGAGTATGATCCAGAATACCTGTTTTATGATATTCATAACACTGTGAAAGAAATACATTACTCAGGGGCCATGCACAATGTTGTTGCGAGTAATGTTGAAAGATACCTTCAATCAGATTCTCACGTTGGGCTTCTTCTGAACAGGCTGTATGATTCAGGGAAGAAGCTGTTCCTCATTACCAACTCTGCTTTCCATTTTGTAGATAAAGGAATGCAATCCATAGCTGGCCCCAAGTGGATGGACTTGTTTGATGTCATCGTGACACAGGCACGGAAACCTCAGTTCTTCAAAGATAATTCGAGACCATTCAGATTTATCTACCACAAGACTGGAACCCCAGCCTGGTCCAGAGTCACTGACCTTAGAAAAGGACAGTACTATGTTGAGGGAAATGTGAAGCAGTTCGTGGAGTTGACCGGCTGGGACCGATCTCAAGTGCTGTACTTTGGTGACCACATCTATAGTGACCTTGCCGACCCTTCCCTGAAGAATGGCTGGAGGACTGGTGGCATCGTACCAGAGCTTGAGGAGGAGATTAAAACTTGCAACTCCCAGCAGTTCAAGGGTCCAGTCATCTGGCTTATGACACTCCAGGATTTGATGAGAAGAACCAAGGGGAGGACGGACCAGGCTGCCAGGAGACCATCAATGAATGGATCAAGGAGAGAAACAGGCTCAGGATatcaaagatcaaccattgatcaaagatcaaccattgatcaaaTGAAAGATAACATCTTTATGATGATCCATTACAATTTGGGAAAATGGCAAAACGATATCCAGAAATATTGGAAGAAGgaaattcattttgccaaaactgtatcgctttactag

Transcript

Chiridota_g29087

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00075	RNase_H	RNase H	Domain	Interproscan
PF05761	5_nucleotid	5' nucleotidase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR008380	Family	HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12103	5'-NUCLEOTIDASE DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0008253	Molecular Function	5'-nucleotidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-