Gene detail

Detailed information of Chiridota_g29612 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g29612	GUANYLATE BINDING PROTEIN	chr_17	21834506	21886976	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g29612

ATGGCAGCTGAGGCCGTTGCATTGAGAGCAAATATCAGCTGCGGTGTTGTAATGGTTGCAAATGCCGGCCATTCCCTTTGTATTGACAACAAATGGCTGCAAATGTCAGCTGATTCCGTTGTAATAGCAGCATATAATAAAGAAAACTGGCTGGAGGGTAGCGAAGAAATATTGACGGGATTCAAATGGAGTGCTGGCAGCAATACTGTGACGAAAGGAATATGGGCGTGGAATAAACCAATCATAATGATGATTCCGTCCCAGGAATCGTCACTGGAAGAAGATGGCTACGAATTACTTAATGCTGAAAAGGAGGTTGCAGTAATCTTGTTGGATACACAAGGTTCTCATGACTTCAGCGGCATTGAATATAACAGGGTGGTGGCTCTAAATACGCTAGTCAGTAATGTTCAAATATTCAATGTGATGGGAAAGTTTACAGAGAAAGACTTGGAATATCTTGAATACTTTGCAGAATACGCTCGCATGGCTGAAAGTGACTCAAAGTCCCCACAGCAAATCTTTGAAAAACTCATTATTCTAGTTCGGGATTGGTGCCTTACAAGCGAACATGGATTTGAAGCAGGACAGGAATATTATAAAGAGCAGAAAAAGAAAGCTGAAGTTTCAAAGAAGTTGTCCGGGATCTACAATCATATTGATAGGTGCTTTTTAGAAAAAGAGTGTTTTCTGATGCCTTTTCCGGGAGAAGCTGTCATGAATAATAACGCTGATTTCAAAGGCCAAACAAATCAATTTAGTGAGAAATTTTGTGAATACCTGAAGAAATTTATCAGTGGTCTGTTAGCACCTGAAAGTATCAAACCGAAGCAACTGCATGGCAAGGCAATGACATGTAAAACATTTCAGCAATATTTTGAGAAGTACGCCGAAATACTTACAAAAGAAAACTTTCCAACAACAGACTCACTTTACAAGGTCACAGTTAAAGCCGGAAATACGGAAGCAGTGCAGCAATGTTTAGATTCATACACAGCAAAAATGAGAGAGGATCAAGAACCAGAGGATCAACTTGAACCAAAGAAATCTGTAAAGAAAGAGGATCAAGAACCAGAGGATCAACTTGAACCAAAGAAATCTGTAAAGAAATTGAGTGAACTACCATTAACAATGAAAGAAGAAGAGCTCACAAGAGCTCACGAAAAGCACAAGACTGATGTTCTGAGAATTTTTCTTGGAATGAAAATTATGGGGCAAAAGGTTGAGAGGGACTACTATAAAGGTATACTTGAATCTCGAATAGATGAGAGTTACAGGGAATTCGAAAAGAATAACAGAATCAAACAGAAACTTGCAGAAAGTAAGATGAAAGAAAATGCCAGCATTGCAATTTTATTCCTGGATGAAAGGATTACAAAGAATTTTCCTAGCGATACGTGTTACGTCCATGATGATGATCTTCGTCGAATGATTGAAAAAGTTGAACAAGAATTGTTGAAGAGTTTTGAAGATGTCCCAGGTTTTCATACATATCCGGACGAGAATTTGAAAGAAGAAGTAAAACGTAATTTGGAAAGTGCATTTAGGAAGAAGAAAGATTCTTTCAGTGAGGAGAACAGGAGACGAACAAAGGATATACTTCGAACAGCTCTTGACGAATACGAGTCACAAGTAAAGCAGAAACTTGTGAAAGATATCATCCAGGATAAAGACAAACTTGCAGAAATTCACAACAAGGCTCAAAATGAGACAAATCATTACTTGAAGAGAGTTTGTATTGGCTTCTCACCAGAAGATGTCAAAAACCTGGACAATTTCTCCCACAAATTGATGGAAAGAAAAAGAGATATATTTGAAAGAAACAACGATAGAGTCAAAGCTTTTCATTATTCTATCACGCAAGTTAGAGATGACGCCATCAATCAGTTTGACAAAGCGGTGGCAGATTGCTTGTTCGAGAAAGGATATTTTCCTTTTCAAAGAATGCTGGATGCATTTCTTAATGATGTCTCGTCAAAAGCAATAGACCTTTTTGATATAAAATGCGGACTTAAAAATCCGACCAACGGCATGATCATAAATGAGGAGAAACAGATCTTACTCAACGAATTGAAATCACGTGAAATCAACTGTGAAGACGTTAATGAAGGAAAGAAGGCGAAAGAGAACACAAGTAAAAGAATTTGGATGAAAAGaaaaaatcgtatcgtagtagtcagacataacaattggcgacgaggatgggatacgaaccctttagtttattttgatccatctaaagacatcacccttgcggtggatgcatcttacaatggtataggggcggttatatcccatatgacctcagaggaaaaaaacatcgcttatacatccagaatcctgagtacagcagaaagaaattattcacagctggaaaaggagtcattagcgatcgtgtatggagtgcgtgcatttcatcagtacttgtgtggaaaacgatttttgttcttaacttattacaaaccattgacgtatttgttgggccctaggaaaggtatacctgtgctagctgcctccagattgcagcgttgcgcaatattgcttagtggctatgaatttgacattaaatatcgaaatgatattaaataa

Transcript

Chiridota_g29612

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02263	GBP	Guanylate-binding protein, N-terminal domain	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015894	Domain	Guanylate-binding protein, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR030386	Domain	GB1/RHD3-type guanine nucleotide-binding (G) domain	Interproscan
IPR036543	Homologous_superfamily	Guanylate-binding protein, C-terminal domain superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10751	GUANYLATE BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-