Gene detail

Detailed information of Chiridota_g30064 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g30064	STERILE20-LIKE KINASE, ISOFORM B-RELATED	chr_17	36946037	37020039	+

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g30064

ATGAATCCTGCAAGGGCTGCTTTTAATAATTCACCGAATATGAGAGGGAATGCTGATCCAGAAAAACTCTTCACAAAATTTGACCGCATCGGCAAGGGGTCATTCGGTGAGGTGTTCAAAGGGGTGAACAACGTCACACAAGAGGTCGTTGCCATCAAGATCATCGACCTAGAGGAGGCTGAGGATGAGATCGAGGACATTCAGCAGGAAATCACGGTGCTCAGTCAGTGCGACTCGCCTTTCGTCACAAAGTATCATGGCTCATATTTGAAGGGTACTAAACTATGGATCATCATGGAGTACTTAGGGGGCGGATCCGCTCTGGACCTCCTCAAGGCGTCCAAAATGGAGGAGGTCTACATTGCCACTATTCTCAGGGAAATACTCAAAGGCTTAGATTATTTACATTCTGAGAGGAAGTTACATCGAGATGTCAAAGCTGCAAATGTGTTATTATCGGAACATGGAGAAGTGAAGCTTGCTGACTTTGGGGTCGCAGGTCAGCTGACAGATACTCAGATCAAAAGAAACACATTTGTAGGTACGCCTTTCTGGATGGCTCCTGAAGTAATAAAGCAGTCTGCGTATGATTCAAAGGCTGATATCTGGTCGTTGGGTATCACCGCGATTGAATTGGCCAAAGGTGAACCGCCCAACTCAGATCTCCATCCAATGAGAGTGCTGTTCCTGATCCCCAAGAACACGCCTCCCACCCTCGAGGGCAACTTCTCAAAGGCCTTCAAGGAGTTTGTAGAAGCTTGTTTAAATAAAGATCCTAAATTTAGGCCGACTGCGAAAGAATTATTAAAGTTCAAATTTCTAAACAAAGGAAAGAAGCCAGCAGTTCTTGTAGATTTGATTGACAGGTACAAGAAATATCTATCAGACGTGGGACCGGACGATGACTCGGATGACGACGATGCAATACGAGAGACAGTTGGTGAAGGCGGCCTCAACGAAGATGAATTTCCTTGGGATTTAGGCACAATCAGAGATGTACCGAAAAATTTCAACACCGCTCAACAGGATTCCGACAGGGTGGCACTCATACCCAGACAGCCAAAGTCAGAGAGCCTGAACAGACTATTCATTCCACTCTTGTCAGAGCTGAAGACAAAATATCCACAGGGAAGTTCTATAGATGAGTTACAAAATGCCTTCCTCCTGGCGGAAGAATCCAGTCCTGGTATCTGCGACCAGGTGGTAAGGAACCTTACAGACACCATTCAGAGttatggactgttatggaatgTTAccagcaaaggcgtcatacgcacccgcgatcttgcgtacatgaccgatgacgacctccaagaagaactagctcaccaacatgtaactgaagcccgtcgtctcgttctaaagagagacggagccgaaactcccaccaacaccatatttcttaccttcgcaacaccaactctcccctcccacatcattgccggctacctgagaatccaggtcgccccttacaatcctaaccctttacgttgctataattgtcagaggagcctaaaggccaattctgaagaaatcgaccttctggcctccaccttcaacccggtcgtcttctgcctacaagaaactttcttgaaaaccaccgaccattactcccttaacaactttgcttgctatcacaaacatcaagtggatgctgacagggcctgtggtggcgtctctattctcgttagacacgatatcccacacagccctgttcgtgtgcacaccgaccttcaggccatctgtatttctatctccctccacaaaactttcactctctgcaatatctatctccctcccaacattcaaccaaccagccttaacaacctcatctctcagcttcccacccccttcatccttcttggtgacttcaacgctcacaaccctctgtggggctctaataccaccacccctagaggcaagttcatcgaaaacgctctctgtcagcacagcctgtccttactggacactaactccccgacctaccttcatcctgccacaggctctctcacctgtattgacctgtctatctgttcccctaacctcctccatgattttagttggagagtcactgctgacctctgtggtagtgatcgttaccctcttcttatacactccaatcttcaaatccccactgagcacacccccaattggaacctcgacaaggctgactggtccctttttgaaaccctctgtgactcacacctctccccccatcttctcgaggatgaggatcccatgtctaacttcagtaatatccttatcaacatcgccacctgctcaatttccaaaacctccaaacccccaaatcatgcccccaacccctggttctcagatgactgcaaaaccgccatcaagaacaggaaaagaactctcaggaactttaaaactaacccgaccacccataaccttaacctctttcgcatcagccgtgccaaggccagacgcactatcaaggacagtaaaaccaacacttggaacaactttatttcttctctcaccaccaacacccccagtaagaagatttggagaatggttaacagcttccacggcagagtgggcaaatcttccatctcccatctctcttggaatggagacctctcaccgcaaaaaaggacatcgttgaccacctcgccgcctctttcagcaacatctcgtcctcgaccaactactccaatgctttcaaaattaaaaaagcttgcgatgaagcccggagaatcacttttctctctgacaactccgaaagctacaacacccctctcaccctttctgaattaa

Transcript

Chiridota_g30064

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR046409	Homologous_superfamily	Programmed cell death protein 10, dimerisation domain superfamily	Interproscan
IPR050629	Family	STE20/SPS1-related Proline-Alanine-rich Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48012	STERILE20-LIKE KINASE, ISOFORM B-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-