Gene detail

Detailed information of Chiridota_g30830 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g30830	PROTEIN SIDEKICK	chr_18	16135848	16175068	-

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g30830

ATGATTTTATTTTTGAAAGTAGAGAATGGCTTACAAGCAATTCAGATTATTAGAGTCAGTGGTAAAGCTATGCGACGTAAGGTTTGGGATATTTGCCTTGCATGGAAAttcagtggtcaagcaagttcatctcacataaaagagggctttagaagaaacaagatggtgaggaaagcattcaaatatcttctcccgttaaggagatattcaaatttaaagctctgtcttatctgtgtagaaatgactgatgcagcatgcttccggactgGTGATACAACCAATACTCGTTTCACGAGCCTGATGCGCCTGAAGCCTCAAGAATTTTCATCAAATACAAATTGTATGACGTACTTAGTTAAGGCATCCCCATATCATGATTATGGCCAAGATATCTGGGATTTGCAAGATCCCTGCATTAGAAGGACATGTCCCAAGGGCAGCCAGTGCTACGTAAACACCACTTCAGGGGAAGCAGAGTGCATGTGCCGACCTACCTGCAAACCTCACGTCAACCCAGTGTGTGGATCTGATGGCAGATTGTACGACAACCACTGTGAGCTTCACCGTGCAGCCTGCTTAATAGGACGCCACATATCGATAATGCATGACGTGAAATGCACGAAGGCAACAACACCACCTCCAGTAACCCCAACAGCCCCACCAGCTGTCTTCAACGATCAAGAACATGAGACTAAAGTCATACTGACATCTACAGCAAGGTCAGACGTCATTGAAAATGACCCTACCACAAAACCTCAAGTGGTGCTTGATGATGTCATCCAGTCTGCAGAGGAAGATATAACACAAGACGAGGATTTAACACCTGTTGACAAAATATGTGAAGAGAAGGACATGGAAATTTACAAGCTCGACCTGATGAAACACTACAAGAATCAATTCAGAAATCCAGATGAGGAACACGATGAAAGGCTGCCTCCACCGGATGCAAGATTCCTGGTATCTTCTATTTTCAATCACCTGGACACTAGCAGAGACAACTATGTAGATGAGGATGAACTTGAGCTTACTCAGTCACGTGACAACATTAACGAACTTTCGGACAAATGTTGCTGGGAAGATATTCTCCTGAATCATGACAGAAATGGTGATGGAAAACTGTCTGCCCAAGAGATGTATGATTTATTTGGTATCGAATCCGTAAAAATCGCGAAGCATTTGAAAGAAAAATCTCTAAAATCAACTGTTGGAGACAGTCTCGTTATTCCATGTGAAATCAGCTCTCACTACAAAGTAAATATAGTCTGGGACAGAAATGGAGGCAAGCTAGAAAATCAGGAGAACGATGGCATAAACTATTATGGAGATGGTAGACTATACTTTGTGGATATGAAGTTGTACCACACTGGTTCGTACACTTGCTACGCTGAAATGTACCCAGAAGTTAAGCAAACGTTTACAATTCAAGTACAAGTACCTCCATCAGTAAAGATATGCCCACATAACCAGCTGAAACCCAAAGGTACAACAGCTACAGTCCAGTGTTATGCCCAAGGTGTGCCTCATCCAACAAAGACTTGGAAGAGGAATAATTTGGACCTACAGGAAACAGATAAATTTCAACTAACAGATTCCAACTCAACTTTACTGGTTCAAAACATCGACTACGCTGATACAGGTATATTTGATTGTATCGCAACTAATGAGATCAGCGATGCAAAAGCATCTGCGTCAGTTTTCATACGAGATTCGTCATCATACATGGACTTGGGAGAAAATAACGTCTTCTACTTCTTTCATAAGTCTGGAATCCAGATAATTGAACCTGCAACATGTGCATTTCACGAATCGTTTGACGCAGCAGATAAGTTGCTGGATTCTGAAGGAGCACTTTGTAAAGTGAACAAGACGTCTGGATCCCGTGAATGTCAGTGGGGTGAAGCAATCAATGTTAATAATCACTACATCTACGTGTCTCAGCCAGACGAGAACAGGATCATCGTCATTGATGTGACGAGGAAGCAAATCGTTGAGTCAATTCAGACAGAAAAAATCCCCGTCGGCTTGAAGTACATTCCACGACTGAACTCGATATGGGTCGATTGTTGGCGAACAAAAGCCGAAAGAGAGTCGAGTAAGCACTCCGTGGAGGTCATCCGGTATGCAAATGGAGCACCTCCTCACTTTCCCATCCACATTGAACCAGTTGGACAGCATTTTGATCTCGTAGAAAACTTTTTCATCCCGACGGAGCAGTTTGTTGGTCAAGGTGATATGAACTTTGGTTACATAGTTCATAAGCAACAGCAGGGCTTGACCAAAGTTGATCTGGAAGACTTGACACATGTTCGCCAATTAGATCTCTCAGATTACGACTGTCACCCGAATTCGGTCGCATTCCTTGCATTGGGCGGATTTGCCCTTGTTAATTGCGATGGCCACACGGGACCAGGAGAGAAACAATTGTTCGTTGATTACATAACAGATAAAGTTGTAAAGATTAATGAGGGTGTCAAAGGTCAACTTTATGTATCTCCGGATGGTCGTTATGTAATAAGTGTCGATATGGCAGAGCAACACATTCAGGTTCAAAAGGTATCAGACGCAGGAAAAGTCACAACCTCTTTTCAAGTCAGCACTAACTTGCATATAAGTGACTTGGGCTTTTTCCCTTCATTGACTTCTCACAGTTTTGACTTATACGCCACCTCACGTGTGCGACAGGACATAATTTACATAAATCTAGAATCAGGAAAGGTTGAGATGATCCCAGACGTGCACAAGCCGATAGAAATCCAAGATTGGCCATGGGATTCAAGAAATAGAAGGATTGTATCAAGCGGACCTTTTGGACCATATATGGTATCCCCAAGTGAAGACCATATCATAATCTTAAATGGACCTATGCATAGAGTACACTGTGACGTTGATAATATTAAGCATGCCAATGTCATATCATGGGTTGGGGTATGCTAG

Transcript

Chiridota_g30830

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00047	ig	Immunoglobulin domain	Domain	Interproscan
PF07648	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR002350	Domain	Kazal domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR011044	Homologous_superfamily	Quinoprotein amine dehydrogenase, beta chain-like	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013151	Domain	Immunoglobulin	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR036058	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44170	PROTEIN SIDEKICK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-