Detailed information of Clavulariidae_g12211 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g12211TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATEDctg00023712608921278477+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13676TIR_2TIR domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000157DomainToll/interleukin-1 receptor homology (TIR) domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR034510DomainSECp43, RNA recognition motif 2Interproscan
IPR035897Homologous_superfamilyToll/interleukin-1 receptor homology (TIR) domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR040434FamilytRNA selenocysteine 1-associated protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR37457TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001514Biological Processselenocysteine incorporationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0007165Biological Processsignal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP