Detailed information of Clavulariidae_g14480 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g14480UNCHARACTERIZEDctg00028867775626818200-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00498FHAFHA domainFamilyInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF01400AstacinAstacin (Peptidase family M12A)DomainInterproscan
PF05345He_PIGPutative Ig domainDomainInterproscan
PF05454DAG1Dystroglycan (Dystrophin-associated glycoprotein 1)FamilyInterproscan
PF08159NUC153NUC153 domainDomainInterproscan
PF16589BRCT_2BRCT domain, a BRCA1 C-terminus domainFamilyInterproscan
PF16770RTT107_BRCT_5Regulator of Ty1 transposition protein 107 BRCT domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000998DomainMAM domainInterproscan
IPR001357DomainBRCT domainInterproscan
IPR001506DomainPeptidase M12AInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR006644DomainDystroglycan-type cadherin-likeInterproscan
IPR008465DomainDystroglycan, C-terminalInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR012580DomainNUC153Interproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR027468Homologous_superfamilyAlpha-dystroglycan domain 2Interproscan
IPR030398DomainDG-type SEA domainInterproscan
IPR034035DomainAstacin-like metallopeptidase domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR040382FamilyNucleolar protein 10/Enp2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR14927UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016010Cellular Componentdystrophin-associated glycoprotein complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030686Cellular Component90S preribosomeInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP