Detailed information of Clavulariidae_g2017 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g2017WD40 REPEAT PROTEINctg00004640481604071928+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00481PP2CProtein phosphatase 2CFamilyInterproscan
PF00892EamAEamA-like transporter familyFamilyInterproscan
PF00931NB-ARCNB-ARC domainDomainInterproscan
PF17908APAF1_CAPAF-1 helical domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000620DomainEamA domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001875DomainDeath effector domainInterproscan
IPR001932DomainPPM-type phosphatase-like domainInterproscan
IPR002182DomainNB-ARCInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036457Homologous_superfamilyPPM-type phosphatase-like domain superfamilyInterproscan
IPR041452DomainAPAF-1 helical domainInterproscan
IPR042197Homologous_superfamilyApoptotic protease-activating factors, helical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22847WD40 REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan
GO:0043531Molecular FunctionADP bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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