Detailed information of Clavulariidae_g2082 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g2082CNH DOMAIN CONTAININGctg00004651582385195337+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00780CNHCNH domainRepeatInterproscan
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF10367Vps39_2Vacuolar sorting protein 39 domain 2DomainInterproscan
PF10607CTLHCTLH/CRA C-terminal to LisH motif domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR006595DomainCTLH, C-terminal LisH motifInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR019453DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 2Interproscan
IPR024964DomainCTLH/CRA C-terminal to LisH motif domainInterproscan
IPR032914FamilyVam6/VPS39/TRAP1 familyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12894CNH DOMAIN CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0034058Biological Processendosomal vesicle fusionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP