Detailed information of Clavulariidae_g2445 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g2445PRE-MRNA-PROCESSING FACTOR 17ctg00005233092953326483+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF13621Cupin_8Cupin-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR003347DomainJmjC domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR032847FamilyPre-mRNA-processing factor 17Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR041667DomainCupin-like domain 8Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR43979PRE-MRNA-PROCESSING FACTOR 17Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP