Gene detail

Detailed information of ENSQHTP00000022207.1 in Bathymodiolus brooksi Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSQHTP00000022207.1	PLASMINOGEN-RELATED	3	104793542	104825114	+

Gene Structure

More details in Jbrowse Sequence

CDS

ENSQHTT00000022207.1

ATGCAACTCTTCGAAAGTTTTCAGGTTCTTCAAAACAAAAACAAATTCAAGCCGAAAGATATTCACCCTGAGAATAGTAAACATGTTAAAGCTGAGAGAGAGGACGGTCACATTTTGACACACGGACAGAAAGTAGAGTTAGGACTGGAATCTGAAAAGCCAGGCGAGGATAATGACAAAGGTGGTATGGAAAGCCGAGCTTTTGCAACAAATAGTAAACTGTGGGAGAAAAAAATAGTACCGTATAAAATTGACCAATCTCTTAATAATCAGGAAGCCATTGGGGTTATAAATCAAGCTATAGCAGTATTTGATAGTCTTACATGTGTACGATGGAGGCCTTACTCAACATCTCTAGCAACTGAAGTTGGACATGATGCTTATATCAATTTTTACAGTGGAAGTGGTTGTTGGTCATATGTTGGTAGAATTGTAAACAGTGGCCAGCAATATATTAGTCTGAGGAGCCCTGGTTGTGTTGGGGTTGGAATTGCAATACATGAAATGTTACATGCGTTAGGACAATGGCATGAACAGAGTAGAGCCGATAGAGATAAACATGTTAGCGTAACATGGGATATTCTGGGCAAACAACCAACAAACGGTGATTACGGAAAATTTCGTACAAGGAACTTCAATCCGTATGACTATGAATCAATACTACATTATTCCTGGACGAATGGATTTAAACCATTACAAAAGGAACTTGCATTCCTAACGTCGTATGGCTCATATATGTCATATTATGATATAGCAGACGTCACAGATGCTTATAGATGTACAGAACAGTGTGTAGACCCACCTGAATGTAAAAATGGCGGATTTGTTAATTTCAAGTGTAATTGTTCCTGTCCATATGGTCTAACAGGTAGAACTTGTGATTCTGTTATCAACAGTGAAGTTTGTGGTGGTATTATTGACCTTATTCCTGGTGGTCAGGACAAAACCATAACAAGTCCAAACTACCCCAATGATTACGACGTTGATACACAATGTGTGTGGTTACTGAGAGCACCAGAAAGTTTCCACGTGCGTGTCGAGGCAGATGTTTTCCATCTTCCATATGATCATGACAACAACAGATGTTTTCATTGGATGGAAGTTAGATATAATTTGGTTGGTCAGACAGGAATCAGGAAATGTGGGGACACAACTGGTGAAATATGGGTTACCTCTCAATGGGGAGAAAAGAACCTCATGTTGTTGATATTCGATAGTGTTTTCGGCAAAGACCATTTCCCAGAAAAAGGATTTTCTTTCCGAGCCAGAACTGTCAAAGACGGATGTATGCCAGATCCTTGTATCTACGGTGTCTGTGTAGATTGTGATGACCAATCATACAAGTGTGAATGTGACCCTGGCTTTGAAGGACAACACTGTGAAATAGTAGATGCATCTAATACTTTGGAATGTTCCTTTGAGAATGGCAGGAAATGTTTCATGAAGAATGCCGCCAATGACCAATTTGACTGGAGGCTTAATTTTGGTACTACAGTATCTGATCTAACTGGTCCAGATGGCGCAGTGGATGGTAAAAACTACTTGTATACTGAAGCGTCGTACCCAAGACAGTTAGGAGATACAGCCGTGTTAGAGTCAGACTTGACATTCTCAGCTGAAGACCGATGTTTAACATTTTATTACAACATGTTTGGAGCTGGAATAGGATCTCTAACTGTAAATTCTACATCTACTGTTCTATGGTCTAAATTCGGTAACCAAGGACTTAAATGGAATTTGGCAAGAGTCGATATACCACAAACAAGTAATTTAAAGATTATAATTGAAGTCAAACGTGGTAGTGACTGGGAAGGTGATATTGCTATTGATGATATCAAACTTGCTCCTGGATTATGTGTAAACCCTGTTCAATCGGAATGTTTGGTCAAATCTAAAGGTCAAGATTATACAGGAACTAAAGCTGTAACCAAAGATGGTGTGACATGTCAGCGATGGGATTCAAATACTCCACACTCTCATAATTATCACGCGTTTGATGGGTATGAAAATTATTGTCGTAACACGCTAGGTGATGATGCTGCACCCTGGTGTTACACTACAGATCTAAATGACAGATGGGATTATTGTGATATACCACATTGTCATATTGAGGAATGTATTCGTTCTATAAATGGCTATGATTACATGGGAACCAAATCTACCACCACTCAAGGGAAGACATGTATTAGTGGTGAAGTCTGTAGAGCTAGTGGAAATTACCTGGCTCCCTGGTGTAAAACTACAGATCAAAATACCTATTGGGACACATGTGCCATTAACAAATGTACCACTGAGCCAAAAGAGTGTTTGCAGACAGGAAAAGGGGTAGATTATTTTGGGACTGAATCTGTAACAGAAAGTGGCATTAATTGTCAGAGATGGGATAAACAGACCCCCCATCAACATAACTACTGGAATCTAGAAGATCAGGAAAACTTTTGTCGAAATCCAGACAATTCGAACCGACCATGGTGTTTTTCAATGAATGGAACTGTGGGAAGGGAATATTGCAGAATTCCATATTGTGAGGATTTACCATGCGAATCTGATCCATGTCTACATGGTGCAACTTGTAACAATACAGACAATAGCGGGTTCGTATGCCACTGTAGAGTTGGTTATGAAGGGGCCACTTGTGATACCAGAACAAAACAAGAAGACTGTAAGAGGACTGCAGATGGTTATGATTATCAAGGGAAGATGAATGTTACTATTGGTAATCGAACATGCCAACGCTGGGAGTTAGATTCTCCTCATGCCCATGGACAAAATGGCCTCCCTGAAAATTACTGTCGTAATCCTGACCATGAACCAGAACCATGGTGCTATACAACGGATACGAGCAAGAGATATGAATTGTGTGATGTTCCCTTTTGTACTACACCTCCAAAAGAATGTCTAGAATCAGAAAAAGGTGCTGAATATTTTGGAACTGTTCATAAGACGGATAACGGGAAGACATGTCAGAAATGGAGTGAGCAATCTCCCCATTCACATTCAGTAACTTATCTTGGGGACCAGGAGAACTTTTGTAGGAATCCCTTTGGAAGTGATGACAGACCCTGGTGCTACACTACAGATCCAGGTGATAGATGGGGATATTGTGCCATACCTTCATGTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00051	Kringle	Kringle domain	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan
PF00629	MAM	MAM domain, meprin/A5/mu	Domain	Interproscan
PF01400	Astacin	Astacin (Peptidase family M12A)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000001	Domain	Kringle	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR000998	Domain	MAM domain	Interproscan
IPR001506	Domain	Peptidase M12A	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR006026	Domain	Peptidase, metallopeptidase	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR018056	Conserved_site	Kringle, conserved site	Interproscan
IPR024079	Homologous_superfamily	Metallopeptidase, catalytic domain superfamily	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan
IPR050759	Family	Serine proteases and regulators with kringle domains	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24261	PLASMINOGEN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004175	Molecular Function	endopeptidase activity	Interproscan
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008237	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-