Gene detail

Detailed information of ENSWXWP00000013230.1 in Bathymodiolus septemdierum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSWXWP00000013230.1	NUCLEOLAR GTP-BINDING PROTEIN 1	13	819757	845679	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

ENSWXWP00000013230

AATCTAGTTTTATAAATAAGGTCAGTTTAACCTAAATACTTAGAACAAGTCAGACAACATTTATCTAGACTTCCATCAATAGATCCTAATACACGTACATTACTAATCTGTGGATTCCCTAACGTTGGCAAATCTAGTTTTATAAATAAGGTTGTAGATACTCCAGGTTTATTAGATCATAGTTTAGAAGACAGAAACACTATAGAGATGCAGGCCATCACAGCGCTGGCTCATCTTCGTGCTGCTGTGTTGTATGTAATGGATGTATCAGAACAATGTGGACATTCTCTGGAGCAACAGCTGGAATTATTTAACAACATCAAGCCTTTGTTTGCCAACAAACCATTAATGGTGTGTGTTAACAAGATAGATGTATTAAAGTTAGACGAGCTGACAGAAGATAAACAGAAAATATTTGAAGAATTTAAATCAGAAGACATACCAGTTTTACAGATGAGTACATTAACAGAGGAAGGAGTGTATGAGGTCAAATCAGAGGCCTGTGAGAGACTTTTGGCTTACAGAATAGAATCTAAAATAAAGACAAAGAAAGTCAATGACATACTGAATAGGTTACATGTAGCACTACCAGCTAAACGGGATACAGTAgagaggCCACCATGTATACCTCAATCAGTTCTAGATAAGAAGAAAGCTATGGAAACAgataaacaaaagaaaaaaacgGAAAGAGATTTAGAATTAGAAATGGGAGATGACTATTACTTAGATCTTAGAAAACACTGGGACATAACAAAGGAGGAGGAAAGATATGACAAAATACCAGAAATCTGGCAAGGCCATAATGTAGCTGACTTCATTGATCCAGAAATTATGGAGAAACTGGATGCTTTAGAAAAGGAAGAAGAATTAAGAGAAGAAGCTGGTTATTATAACAACGAGGATAGTGATGATGACAATGAAGAATTGAAAGAAATACGAGGAACAGCTGCTAGGATAAGAGAAAAAAGGAacttgataatgatggaatcaaAGGAGAAGAGAACAGTTGAGAAACCTAGGTTACCAAGAACTGCCAAGAAATTAAATGTTAAAAGAATGGCTGCAGAAATGGGAGAACTTGGATTAGAAATAGAGGATGGAGAAGAGTCACACATAGGTAAAGCCAGATCACGTAGTGTTAGTAAGAAAGCTATGAAGAGAAAGAGAGAACAATCAATGGAAGTTGACACTGTCAGGTCAAGGAGCAGGTCTAGAACAGTACCTAGAGACCAGTCTGGTGTTAGAGATGCAGTGatggcAAAGAAGGTCAAGAAGATTGCTATTAAAGCACAAAAATCAAGAAACCACGACGCACGTAAAGGAGAAGGTGATCGTGTTATACTGGACATGAAACCAAAACATTTGTTCTCCGGCAAGAGAAAGATGGGAAAGACACAGAGACGTTAAATCTTATTGTTATGGTTACAACaacaaatttaaacatttttaccacaaatacatgtacatgtatttcattttaggaataacatagaacaattttttattgtaatatggaaaaaaatagaaTGACATGCAATTTGTTTGGTTAAAGAATATTGGAAAAAAAATGAGATTTTATTCATAGGTGAATACAGATTCCATGATATGATTGCTTGATATCAAAACAGTTACATGTATAAATTTAATTAAGTTTATGTGATTGCTAGAGCTCTGTATTTGGACCCTTATTAAAAATATAAGCTACTTTGTATTTTTTAATTTCACCTGTAGAGTTCAGAATTATGAAAGAACAGTTGGAAGAAACCAATTGTTCCAGGTCACAGCTATTCTGATTCCAGAAATGTATGGTTGCTAGGTCATTTTCAGAAGAAAAAACAAGTCTGAGTCTTCCAGTATATTTATGCACAGTTGGAATGCAATTGTTCCATGTCACAGCTATTATTCTTATAGTTCAATAAATGTATTAAGTTACTAGATACAGGTAAAGTTACTTCTTAAAAATGATAAGTCTGAGAGTCGTACAGGACATTTATCAAAAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06858	NOG1	Nucleolar GTP-binding protein 1 (NOG1)	Family	Interproscan
PF08155	NOGCT	NOGCT (NUC087) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010674	Domain	Nucleolar GTP-binding protein 1, Rossman-fold domain	Interproscan
IPR012973	Domain	NOG, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031167	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45759	NUCLEOLAR GTP-BINDING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0042273	Biological Process	ribosomal large subunit biogenesis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-