Gene detail

Detailed information of ENSWXWP00000020604.1 in Bathymodiolus septemdierum Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
ENSWXWP00000020604.1	PROTEIN TORNADO 1	2	6184180	6240471	-

Gene Structure

More details in Jbrowse Sequence

CDS

ENSWXWP00000020604

ATGAAGGTCATGGTTGTGGGATATGGAGGTAGAGGTAAATCTACCCTCCTACGAGCTCTGATGAAGGTAGCCAAACCTGCTGCTCACAATACACCAACTGTTGGAATTATTGTTAAGGATTGGGTATTTGAAAGATACAGAAAAGATATTGGGAAGAAAGTTGTGTATACATTAAGTACATGGGACTTTGCTGGACAAGAAGAATTCTATAGTACACATCAATGTTACTTATCAAACAGAGCATTATACTTGGTTGTCCTGAGGATGAACAAAGGATTAGAAGAAGTGAATCTATTAAAGTCTTGGTTATCAAACATCTATGCCAGAGCTCCTGGTTGTCCTGTTATTGTGGTTGGCACACATTATGACAAGATCCACAAATCTAAGAGAATTGAAGTGGTACATCAGTTTATAGAAAGACTGAATGAACTTAAAACTAAGCCAGGTTTTCCTGATATACAAGAATTTTGTCCTGTGGATTGTAGTTTAGAGAAAAATAACCTTGAACTTGAGACACTGAGAGATAAAATAAAGGATAGTATTGACAACTACAAAGTAAGAGGAGAACATGTGATGGGACAAATGGTACCAGCTAGTTATGTGCAATTATCAGAAAGGCTAGCAGAAGAAGGTCAATCTTTACTGAAGAAGTCCTACCCGATCATAAGACATAATCAGTTGTTAAAGATGGTTAAGCAGTCTTCTATAGATTTAGAGGAAGATGAACTCAAACAGGCCATTAGATTCCTACATGAGTTTGGGATCTTGTTACATTATGAAGACACAGCACTCCAGTTGAAGGACTTGTATTTTATAGATCCAGGCTGGTTATGTAGGATGATGGCTCAAGTGATCACAGTCAGACAAATTAATCCATTCATCAAAAATGGGattttAAGGAAAAGTGACACCAATGTGTTGTTTACTGGAAAAAAGGTGGATAAAGAGCAGTCATTTATATATCCACCGTCATTGATTCCACAATATCTTAAGTTACTGGAAAAATTTGAGATAGCATTACCTCATTCAGAAACAGAGCTACTTATACCCTGCTATTTACCAGATAAGAAACCAGTTCTTTCATTGCCATCTTTACAGAAACATGAAAAGATATGCAGATTATACATTATGCCATATGTACAACTTGGACTGTGGCCTCGACTTATTACAAGGCTAATTACATTCTCAACCAGTTTTCTGACAAAGTTACTGCTGGAGGTTGATAAACAACCTACAATAAAGTACTGGAAGAAAGGAGTCAGTAGTATATGGTCTGAGAATGCTTTTTACTTGGTGGAATTCCATAGCAATGAAAAAGAAGAAATCCATGTGACTGTACCAAATACACAGAGTGGAGCAGGGTTACTAGGACTGTTGGTAGATCATTTAGATTCTCTGATAGAAGAATGGTACCCTGGACTGACCACTATTGATCCATACCTAGGAAGAGAATTACTGGAGAAACTGGTCCCCTGTGTTGGTTGTATAGaacCAAATGTTAACATGTTTCGATTAGACGACTTGCTTAACAAAACAGAATTTGGTGGAACAGTTTATTGTGATGTTCATGGTGGTATGGTCAAGATATCAGCACTTGCACCAGAGCTTGTGTTTATGGACCTAAATTCAGATATAATCATGGATGAGACACAGTTAGATTTTGTTGAAAGTGAAGACAAATTTCTTGGAGATGGAGGTTATGGTGCTGTGTATAAAGCCACATATAAAAATCAgCCAGTAGCAGTGAAGATATTTGCAGCCATTGGTGACATTCATCCACTGAAGATGTTAAGACAGGAGGCTACTGTTCTGAGGTGTTTGAAGCATCCAAGTGTGGTGTCTTTGTTGGCTGTTGGTATCAATCCTCGTGTGATGGTCTTAGAGCTGGCTAAGCATCTGTCATTGGGTGTTGTTCTGAAACAAGAAGGAAAACTGGAGCAAATTGTACAACATAAAATAGCCTTACAGGTTGCTGAAGGCTTAGCcaat

Transcript

ENSWXWP00000020604

GCTACAGCATATTTCCGTATGAAGGTCATGGTTGTGGGATATGGAGGTAGAGGTAAATCTACCCTCCTACGAGCTCTGATGAAGGTAGCCAAACCTGCTGCTCACAATACACCAACTGTTGGAATTATTGTTAAGGATTGGGTATTTGAAAGATACAGAAAAGATATTGGGAAGAAAGTTGTGTATACATTAAGTACATGGGACTTTGCTGGACAAGAAGAATTCTATAGTACACATCAATGTTACTTATCAAACAGAGCATTATACTTGGTTGTCCTGAGGATGAACAAAGGATTAGAAGAAGTGAATCTATTAAAGTCTTGGTTATCAAACATCTATGCCAGAGCTCCTGGTTGTCCTGTTATTGTGGTTGGCACACATTATGACAAGATCCACAAATCTAAGAGAATTGAAGTGGTACATCAGTTTATAGAAAGACTGAATGAACTTAAAACTAAGCCAGGTTTTCCTGATATACAAGAATTTTGTCCTGTGGATTGTAGTTTAGAGAAAAATAACCTTGAACTTGAGACACTGAGAGATAAAATAAAGGATAGTATTGACAACTACAAAGTAAGAGGAGAACATGTGATGGGACAAATGGTACCAGCTAGTTATGTGCAATTATCAGAAAGGCTAGCAGAAGAAGGTCAATCTTTACTGAAGAAGTCCTACCCGATCATAAGACATAATCAGTTGTTAAAGATGGTTAAGCAGTCTTCTATAGATTTAGAGGAAGATGAACTCAAACAGGCCATTAGATTCCTACATGAGTTTGGGATCTTGTTACATTATGAAGACACAGCACTCCAGTTGAAGGACTTGTATTTTATAGATCCAGGCTGGTTATGTAGGATGATGGCTCAAGTGATCACAGTCAGACAAATTAATCCATTCATCAAAAATGGGattttAAGGAAAAGTGACACCAATGTGTTGTTTACTGGAAAAAAGGTGGATAAAGAGCAGTCATTTATATATCCACCGTCATTGATTCCACAATATCTTAAGTTACTGGAAAAATTTGAGATAGCATTACCTCATTCAGAAACAGAGCTACTTATACCCTGCTATTTACCAGATAAGAAACCAGTTCTTTCATTGCCATCTTTACAGAAACATGAAAAGATATGCAGATTATACATTATGCCATATGTACAACTTGGACTGTGGCCTCGACTTATTACAAGGCTAATTACATTCTCAACCAGTTTTCTGACAAAGTTACTGCTGGAGGTTGATAAACAACCTACAATAAAGTACTGGAAGAAAGGAGTCAGTAGTATATGGTCTGAGAATGCTTTTTACTTGGTGGAATTCCATAGCAATGAAAAAGAAGAAATCCATGTGACTGTACCAAATACACAGAGTGGAGCAGGGTTACTAGGACTGTTGGTAGATCATTTAGATTCTCTGATAGAAGAATGGTACCCTGGACTGACCACTATTGATCCATACCTAGGAAGAGAATTACTGGAGAAACTGGTCCCCTGTGTTGGTTGTATAGaacCAAATGTTAACATGTTTCGATTAGACGACTTGCTTAACAAAACAGAATTTGGTGGAACAGTTTATTGTGATGTTCATGGTGGTATGGTCAAGATATCAGCACTTGCACCAGAGCTTGTGTTTATGGACCTAAATTCAGATATAATCATGGATGAGACACAGTTAGATTTTGTTGAAAGTGAAGACAAATTTCTTGGAGATGGAGGTTATGGTGCTGTGTATAAAGCCACATATAAAAATCAgCCAGTAGCAGTGAAGATATTTGCAGCCATTGGTGACATTCATCCACTGAAGATGTTAAGACAGGAGGCTACTGTTCTGAGGTGTTTGAAGCATCCAAGTGTGGTGTCTTTGTTGGCTGTTGGTATCAATCCTCGTGTGATGGTCTTAGAGCTGGCTAAGCATCTGTCATTGGGTGTTGTTCTGAAACAAGAAGGAAAACTGGAGCAAATTGTACAACATAAAATAGCCTTACAGGTTGCTGAAGGCTTAGCcaatct

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47679	PROTEIN TORNADO 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-